DN618439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_LODEL (ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus GN=DRS1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19 Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 280 DNDHSDSELDQHEDYKPEDEDDFSNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLY 603 D D ++ E ++ E ED D+F + +T + ++ + +F EL LSRP+L++ + LG++ PTP+QA+ IP+AL G+DI SA TGSGKTAA+ +P +ERLLY Sbjct: 158 DEDENEDEDEEEEVDTKEDLDNFYESQETNT-----SASALKSKTFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDIVASAQTGSGKTAAYLIPIIERLLY 260
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_YEAS7 (ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DRS1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 57/171 (33.33%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 187 ESVSDEHFRRRTTSVDFKITKSLQQRSVPIVDNDHSDSELDQHEDYKPEDE-------------------DDFSNAGDTKS----FFAPA----DGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRI 618 E E + S D ++ P+ + D + SE ++ E+ + E+E D+ D++ F+AP + +F L+LSRP+L+ +LGY KP+PIQ+A IP+AL G+DI A+TGSGKTAAF +P +ERLLY+P +I Sbjct: 132 EETEKEKVEKENDSDDEELAMDGFGMGAPMNNGDENQSEEEEEEEEEEEEEEEEEEEEQEEMTLEKGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKI 302
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_PICGU (ATP-dependent RNA helicase DRS1 OS=Pichia guilliermondii GN=DRS1 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.388e-18 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 280 DNDH-SDSELDQHEDYKPEDEDDFSNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRIPA 624 +N+H ++SE +Q ++ DED + + F + SF L LSRPLL+ LGY+ P+ IQAA IP+A+ G+DI A+TGSGKTAA+ +P +ERL+Y+P + A Sbjct: 158 ENEHEAESEDEQEQEISENDEDSAAAIAE----FYEESKTTEKITSFQALQLSRPLLKGVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIERLIYKPAAVSA 269
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_USTMA (ATP-dependent RNA helicase DRS1 OS=Ustilago maydis GN=DRS1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.731e-18 Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 286 DHSDSELDQHEDYKPE--DEDDFSNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPK 612 D SD E +Q + K ED + + D+ S + A +SF +LSRP+LRA +L + KPTPIQ+ IP+AL G+DI A+TGSGKTAAF +PT+ERL +R K Sbjct: 293 DDSDLETEQEKARKAAFFAEDPIATSADSSSKSKSTNDAE---SSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAK 400
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: RRP3_MAGGR (ATP-dependent rRNA helicase RRP3 OS=Magnaporthe grisea GN=RRP3 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 51/137 (37.23%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 238 KITKSLQQRSVPIVDNDHSDSELDQHEDYKPEDEDDFSNAGDTKSFFAPADGASFHAN------------SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPK 612 K ++Q++ ++D D + D+ E+ + +++D A + + A+ SF +L + PL ACEAL + KPTPIQ IPLAL GRD+ G A TGSGKTAAFALP L+ LL +P+ Sbjct: 41 KAAAPIKQKAREAEEDDDDDDKDDKDEEDEEQNDDSSDEASENDDSTPTVEEATKEGQTELPSKEETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKPQ 177
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: RRP3_ASPOR (ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae GN=rrp3 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16 Identity = 50/108 (46.30%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 286 DHSDSELDQHEDYKPEDEDDFSNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRP 609 DHSDSE + ED N + + P++ SF EL L L AC+++GY PT IQA IPLAL GRD+ G A TGSGKTAAFALP L+ L+ +P Sbjct: 18 DHSDSEA-----HSSASEDAAPNTTEQEQ--EPSEAPKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP 118
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: RRP3_AJECN (ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=RRP3 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.408e-16 Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 292 SDSELDQHEDYKPEDEDDFSNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRI 618 SD E E + ++ + A + SF +L + L ACEALGY PTPIQA IPLAL GRD+ G A TGSGKTAAFALP L+ L+ +P+ + Sbjct: 20 SDLESSSSEASQQSHDEQLTAANEQDDESPQVQREEAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKPQSL 128
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: RRP3_EMENI (ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans GN=rrp3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.107e-16 Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 310 QHEDYKPEDEDDFSNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRI 618 Q E + + S+ G K + A SF EL + L ACE +GY PTPIQ+ IPLAL GRD+ G A TGSGKTAAFALP L+ L+ P+ + Sbjct: 13 QPETNSDSEAESVSSRGSAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALMEAPQTL 115
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans GN=DRS1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.364e-16 Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 316 EDYKPEDEDDFSNAGDTKSFFAPADGASFHAN------------SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLYRP 609 ++ + E+E++ + K P D A A+ SF L LSRP+L+ L ++KPTPIQ+A IP+AL G+DI A TGSGKT A+ +P +ERLLY+P Sbjct: 87 QEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKP 196
BLAST of DN618439 vs. ExPASy Swiss-Prot
Match: RRP3_YEAST (ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae GN=RRP3 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 57/127 (44.88%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 223 TSVDFKI-TKSLQQRSVPIVDNDHSDSELDQHEDYKPEDEDDF-SNAGDTKSFFAPADGASFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERL 597 TS+ KI K+L+ + I SE D ED E + S + T S SF ELNL L++AC+ L YSKPTPIQ+ IP AL G DI G A TGSGKTAAFA+P L RL Sbjct: 17 TSLAEKIRAKALENQKKLIEAEKEGGSESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL 143 The following BLAST results are available for this feature:
BLAST of DN618439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618439 ID=DN618439; Name=DN618439; organism=Citrus sinensis; type=EST; length=624bpback to top |