CX046818

Overview
NameCX046818
Unique NameCX046818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = -3
Query:  331 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYP 642
            V++YP CP+ DL  GL+ HTD G + LL QD QVGGLQ  KD    WI VQP+  A V+N GD    LSNGR+K+A H+ +  S+ +R SIA+F NP+ +AT+ P
Sbjct:  159 VSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDG--RWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAP 261          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 60/163 (36.81%), Postives = 88/163 (53.99%), Query Frame = -3
Query:  220 GLEKEALTKACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPL-KIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKL 699
            GLEK  L KA    D+   + +NYYP CP+PDL LG+  HTD   IT+L+ ++V GLQ  KD+   W  V+ I  A ++++GD    +SNG++K+  H+  VN + +R+S   F  P PE    P+ K+   E P           ++ K  KD    +L KL
Sbjct:  184 GLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVHKDD--HWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDENPA---------KFKTKKYKDYVYCKLNKL 335          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 55/127 (43.31%), Postives = 78/127 (61.42%), Query Frame = -3
Query:  331 GLEKEALTKACVDMDQK---IVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYP 699
            GLEK  L KA            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  KD+   WI V P+  + V+NLGD    ++NG++K+  H+ +  ++ +R+S+A+F NPA +A +YP
Sbjct:  137 GLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYP 261          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 56/123 (45.53%), Postives = 73/123 (59.35%), Query Frame = -3
Query:  331 GLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYP 699
            G+E+    +   D D    +NYYP+C QP+L LG   H DP ++T+L QDQVGGLQ   DN   W ++ P   AFVVN+GD    L+NGR+K+  H+AVVNS   R + A F  P  E  V P
Sbjct:  209 GVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDN--KWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKP 329          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = -3
Query:  331 GLEKEALTKA------CVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYP 699
            GLEK  LTKA            K  V+ YP CP+PDL  GL+ HTD G I LL QD +VGGLQ  KD    W+ V P+  + VVNLGD    ++NGR+K+  H+ V  ++ +R+SIA+F NP  +A + P
Sbjct:  142 GLEKGYLTKAFRGPAGAPTFGTK--VSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDG--EWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISP 267          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 59/130 (45.38%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  331 GLEKEALTKA------CVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYP 699
            GLEK  LTKA            K  V+ YP CP+PDL  GL+ HTD G I LL QD  VGGLQ  KD    W+ V P+  + VVNLGD    ++NGR+K+  H+ V  ++ +R+SIA+F NP  +A + P
Sbjct:  142 GLEKGYLTKAFRGPAGAPTFGTK--VSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDG--EWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISP 267          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 62/161 (38.51%), Postives = 83/161 (51.55%), Query Frame = -3
Query:  217 ACVDMDQKIV--------VNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSE-MYRRKMSKDLELARLKKLA 672
            A V+ +QKI         +N+YPKCP P   LGL  HTD G  T +LQ  V GLQ  +     W+TV  + GA VVN+GD    L+NGRF +  H+AVVN +S R+S+  F  P     V PL+      P     + + E M  RK +     + LK +A
Sbjct:  193 AAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVA 353          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = -3
Query:  325 LEKEALTKACVDMD--QKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLK 696
            ++ E L K   D+D  Q + +NYYP CPQPD  +GL  H+D   +T+L+Q + V GLQ  KD GK W+ V+P+  AF+VN+GD    ++NG +++ +H+ VVNS   RLSIATF N      V P K
Sbjct:  195 IKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKD-GK-WVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAK 319          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 62/161 (38.51%), Postives = 82/161 (50.93%), Query Frame = -3
Query:  217 ACVDMDQKIV--------VNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSE-MYRRKMSKDLELARLKKLA 672
            A V+ +QKI         +N+YPKCP P   LGL  HTD G  T +LQ  V GLQ  +     W+TV  + GA VVN+GD    L+NGRF +  H+AVVN  S R+S+  F  P     V PL+      P     + + E M  RK +     + LK +A
Sbjct:  193 AAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVA 353          
BLAST of CX046818 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = -3
Query:  325 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLK 642
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  KD  + WI V P+  + VVNLGD    ++NG++K+  H+ +  ++ +R+S+A+F NP  +A +YP K
Sbjct:  159 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--EQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAK 263          
The following BLAST results are available for this feature:
BLAST of CX046818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO_MUSAC2.799e-2251.431-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
FLS_PETCR8.143e-2236.81Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
ACCO4_PETHY8.143e-2243.311-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
GAOX3_ARATH1.064e-2145.53Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCO1_ORYSJ1.389e-2145.381-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI1.389e-2145.381-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
G3O22_WHEAT1.814e-2138.51Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
SRG1_ARATH2.369e-2144.88Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
G3O23_WHEAT2.369e-2138.51Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
ACCO1_SOLLC2.369e-2145.791-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10D06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10D06-H11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046818 ID=CX046818; Name=CX046818; organism=Citrus sinensis; type=EST; length=701bp
TGAAGAAGTAGCCCCATTTTATTTTCACTGGCATCGTTCACGAAAACATA
CAGAACTCCATAATAATAAAAAGTAAATAAGCAGCAGGAAATGCGATGCA
TAAGAAGCAACGAAGGGTAGGGTAGCCTTAATTAGGGGTCAAAGGCTCTA
AGCCAAGATCTCCTCAATGGGCTTGGCGTCCAATTTAGCTTTCTCGGAAT
ATTGTTTCTTCTCGTTGGCCAGCTTCTTAAGCCTGGCGAGTTCAAGGTCT
TTGCTCATCTTCCTCCTGTACATCTCAGAAAATGGAATTGGTTCCTCCAG
TACAGGCTTCTCTCCCTCTCTTATCTTGAGTGGATACACTGTTGCCTCTG
GTGCTGGGTTTTGGAATGTAGCAATCGATAATCTGCTGCTGTTTGAGTTC
ACCACTGCTTGGTGATCCGCGTTCTTAAACCTCCCATTGCTCAGATAATG
ACCATGATCACCCAGATTGACCACAAAAGCACCTTCAATAGGTTGAACGG
TGATCCACGTCTTACCATTATCCTTGGTAGCCTGGAGGCCACCAACTTGA
TCTTGGAGCAAGAGTGTGATGGTTCCCGGATCCGTGTGGCGTTTGAGTCC
GAGAGTGAGGTCGGGTTGTGGGCATTTTGGATAGTAATTGACAACAATCT
TTTGGTCCATGTCCACACATGCTTTGGTCAAAGCTTCCTTCTCCAATCCC
A
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