CX046817

Overview
NameCX046817
Unique NameCX046817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 80/227 (35.24%), Postives = 126/227 (55.51%), Query Frame = 3
Query:  120 PVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVK-DWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQK---IVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            P+I+L  ++  G +RA   + I +ACE+WG F++V+HG+  +++  + ++    +    E++ K  ++   KG       +Q EV   DW    T+F     + + S+ PD  E + EV ++++ +L  +A +LL++L E +GLEK  L  A            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD  + WI V P+  + VVNLGD
Sbjct:    5 PIINLEKLN--GDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVAS--KG----LEAVQAEVTDLDWES--TFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--EQWIDVPPMRHSIVVNLGD 219          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25
Identity = 80/227 (35.24%), Postives = 122/227 (53.74%), Query Frame = 3
Query:  120 PVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVK-DWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQK---IVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            P+ISL  ++ V  +RA   + I +ACE+WG F++V+HG+  +++  + ++    +    E++ K  ++     G      +Q EV   DW    T+F       + S  PD  E + EV ++++ +L  +A +LL++L E +GLEK  L  A            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD    WI V P+  + VVNLGD
Sbjct:    5 PIISLDKVNGV--ERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG------VQAEVTDMDWES--TFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPMRHSIVVNLGD 219          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.498e-25
Identity = 81/227 (35.68%), Postives = 122/227 (53.74%), Query Frame = 3
Query:  120 PVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVV-KDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDM---DQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            PVI++  ++  G +RA     I +ACE+WG F++V+HG+  +L+  + R+    +    E++ K  ++     G      +Q EV   DW    TYF       + S  PD  E +  V K+++++L  +A  LL++L E +GLEK  L KA       +    V  YP CP+ DL  GL+ HTD G I LL Q D+V GLQ  KD+   WI V P++ + V+NLGD
Sbjct:    5 PVINMEKMN--GEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEG------IQAEVTDMDWES--TYFLRHLPQSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMKHSIVINLGD 219          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.262e-25
Identity = 67/208 (32.21%), Postives = 106/208 (50.96%), Query Frame = 3
Query:  180 KIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSR-WPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQK-----IVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            +I  AC  WG FQ+ +HGV   L+ D+  L    F LP + KLK   S     G+ V+        + W E  T    P    D+ + WP     + ++ +EY + +  +A KL+ +   ++G+ +E +  A +  D       + +N+YP CP+PD  +GL  HTD   +T+L Q+   GLQ  +D+   W+TV P  G+ VVN+GD
Sbjct:   70 QIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFTITGSPLN--DFRKLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDD-LGWVTVPPFPGSLVVNVGD 274          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.262e-25
Identity = 77/228 (33.77%), Postives = 125/228 (54.82%), Query Frame = 3
Query:  114 EIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDM---DQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            + PVI++  ++  G  R  +  +I +ACE+WG F++V+HG+  +L+  + +L  E +    E++ K  ++   KG   V + +      DW    T+F       + S   D  E + +V KE++D+L  +A ++L++L E +GLEK  L K        +    V+ YP CP+P+L  GL+ HTD G + LL Q D+V GL   KD GK W+ V P+  + V+NLGD
Sbjct:    4 DFPVINMNNLN--GESRVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEMVA--SKGLDSVETEIND---TDWES--TFFLRHLPVSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKD-GK-WVDVPPMHHSIVINLGD 220          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 5.566e-25
Identity = 81/257 (31.52%), Postives = 120/257 (46.69%), Query Frame = 3
Query:   21 LTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSS---HLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLG 782
            L A     +L  SFV   D+ P       S  +P+I      D+   R E+ + I+EA ++ G FQVV+HGV  +++ DM  +  +FF LP  +K         K   + S       GE  K WR+ +            + WPD P+G  +V ++++ +   V  +LL +L E MG++ +         +  + +N+YP CP PD  LG   H D   ITLLL   V GL+ +      WI V P   AFVVN G
Sbjct:    5 LHATPAHVSLPESFVFASDKVPPATKAVVS--LPII------DLSCGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGE--KYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKG--DWIKVDPAPNAFVVNFG 249          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.566e-25
Identity = 67/215 (31.16%), Postives = 107/215 (49.77%), Query Frame = 3
Query:  141 IDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLK-FDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLG 782
            I D+   R E+ + I+++ +++G  QVV+HG+   ++ +M  +  EFF +P E+K + F     ++      S  +    K W +++    +P  S D   WP KP+   EV   Y+    GVA ++L +L E +GL  +            + +NYYP  P P  TLGL  H D   +T+LL   V GL+     G  WI VQP+  + V+N G
Sbjct:   37 IIDMSRGRDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKYWIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGG--WIKVQPVPNSLVINFG 248          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.566e-25
Identity = 80/227 (35.24%), Postives = 123/227 (54.19%), Query Frame = 3
Query:  120 PVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVK-DWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQK---IVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            P+I+L  ++  G +R    + I +ACE+WG F++V+HG+  +++  + +L    +    E++ K  ++   KG       +Q EV   DW    T+F       + S  PD  + + EV ++++ +L  +A +LL++L E +GLEK  L KA            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD    WI V P+  + VVNLGD
Sbjct:    5 PIINLEKLN--GSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAS--KG----LEAVQAEVTDLDWES--TFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPMRHSIVVNLGD 219          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.269e-25
Identity = 77/234 (32.91%), Postives = 128/234 (54.70%), Query Frame = 3
Query:  108 SNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEK-LKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKA------CVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            ++  PVI++  +   G +R    +++ +ACE+WG F++++HG+  +L+ ++ ++  + +    E++ L+F     K+G   V+   +     DW    T+F       + +  PD  + +  + K ++ +L  +A +LL++L E +GLEK  LTKA            K  V+ YP CP+PDL  GL+ HTD G I LL Q D+VGGLQ  KD    W+ V P+  + VVNLGD
Sbjct:    4 TSTFPVINMELL--AGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEK----LDWES--TFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTK--VSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDG--EWVDVPPMRHSIVVNLGD 225          
BLAST of CX046817 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.269e-25
Identity = 77/234 (32.91%), Postives = 127/234 (54.27%), Query Frame = 3
Query:  108 SNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEK-LKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKA------CVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 785
            ++  PVI++  +   G +R    +++ +ACE+WG F++++HG+  +L+ ++ ++  + +    E++ L+F     K+G   V+   +     DW    T+F       + +  PD  + +  + K ++ +L  +A +LL++L E +GLEK  LTKA            K  V+ YP CP+PDL  GL+ HTD G I LL Q D VGGLQ  KD    W+ V P+  + VVNLGD
Sbjct:    4 TSTFPVINMELL--AGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEK----LDWES--TFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTK--VSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDG--EWVDVPPMRHSIVVNLGD 225          
The following BLAST results are available for this feature:
BLAST of CX046817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ACCO1_SOLLC8.587e-2635.241-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO1_PETHY1.121e-2535.241-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_DIOKA2.498e-2535.681-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
G3OX1_ARATH4.262e-2532.21Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO3_CUCME4.262e-2533.771-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
IDS3_HORVU5.566e-2531.522'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
IDS2_HORVU5.566e-2531.16Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCO3_PETHY5.566e-2535.241-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_ORYSJ7.269e-2532.911-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI7.269e-2532.911-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10D06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10D06-H11-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046817 ID=CX046817; Name=CX046817; organism=Citrus sinensis; type=EST; length=786bp
AATTCATGGCTCCTTCAACCCTCACCGCCCTTGCTGGGGAGAAAACCCTC
AACCCAAGCTTTGTCCGCTTTCAAGATGAGCGTCCCAAGGTGGCTTATAA
TGAATTCAGCAATGAAATTCCTGTGATTTCACTTGCTGGGATTGATGACG
TCGGTGGCAAAAGGGCTGAGATTTGCAAGAAAATTGTTGAGGCGTGTGAG
GACTGGGGAATCTTTCAAGTTGTTGATCATGGTGTTGATGCTAAGCTTAT
ATCCGATATGACTCGTCTTGCTACAGAATTTTTCGCCCTGCCCCCTGAGG
AGAAGCTCAAGTTTGATATGTCCGGTGGGAAGAAGGGTGGCTTCATTGTC
TCTAGCCACCTTCAGGGTGAAGTAGTAAAAGATTGGCGTGAAATAGTGAC
GTATTTCTCATTCCCAAAGCAAAGCCGAGATTACTCACGTTGGCCGGACA
AGCCAGAAGGCTGGATGGAAGTAACAAAAGAATACAGTGACAAATTAATG
GGAGTGGCGTGCAAGCTTCTGGAAGTTTTATCAGAGGCAATGGGATTGGA
GAAGGAAGCTTTGACCAAAGCATGTGTGGACATGGACCAAAAGATTGTTG
TCAATTACTATCCAAAATGCCCACAACCCGACCTCACTCTCGGACTCAAA
CGCCACACGGATCCGGGAACCATCACACTCTTGCTCCAAGATCAAGTTGG
TGGCCTCCAGGCTACCAAGGATAATGGTAAGACGTGGATCACCGTTCAAC
CTATTGAAGGTGCTTTTGTGGTCAATCTGGGTGATC
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