DN618433

Overview
NameDN618433
Unique NameDN618433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_THICR (Flavoprotein wrbA OS=Thiomicrospira crunogena (strain XCL-2) GN=wrbA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.047e-26
Identity = 62/138 (44.93%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  112 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            TKV ++YYSMYGHVE +A+ I +GA SVEGVE  + +VPE + +E   K         PI TP+ELA+ D  +FG PTRFG M AQ + FLD TGGLW   +L  K   +F               +  T L H+GMI
Sbjct:    2 TKVLVLYYSMYGHVETMAKAIAEGAGSVEGVEVTIKRVPELMTDEQAKKAGVKLDQSAPIATPSELADYDAIIFGTPTRFGNMCAQMRNFLDQTGGLWAGGKLINKVGSVFTSTGTQHGGQETTITSFHTNLFHYGMI 139          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_GEOUR (Flavoprotein wrbA OS=Geobacter uraniireducens (strain Rf4) GN=wrbA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.047e-26
Identity = 62/141 (43.97%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA----PPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV I YYSMYGH+ ++AE + +GA  V G E  + +VPETLP +VL KM A       + +P+ T  ELA+AD  +FG PTRFG M  Q + FLDATGGLW    L GK   +F              L+    L+H GM+
Sbjct:    2 KVLIAYYSMYGHIHRMAEAVAEGAREVAGAEVLIRRVPETLPADVLEKMGAVETQKKMAQIPVCTIGELADADAIIFGTPTRFGNMCGQMRQFLDATGGLWMKGSLVGKLGSVFTSSATQHGGQESTILSFHITLLHQGMV 142          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SHIDS (Flavoprotein wrbA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=wrbA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.787e-26
Identity = 60/138 (43.48%), Postives = 82/138 (59.42%), Query Frame = 1
Query:  112 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            TKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    2 TKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALTI (Flavoprotein wrbA OS=Salmonella typhi GN=wrbA PE=3 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 2.333e-26
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G+F               T  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLGGVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ALHEH (Flavoprotein wrbA OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.047e-26
Identity = 57/137 (41.61%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+  +A+ + +G+  V G    + +VPE + EE L K  AP   D P+  P ELA+ DG +FG PTRFG MA Q + FLD TGGLW   +L GK   +F               +  T L+HHGM+
Sbjct:    3 KILVLYYSMYGHIRTMADAVAEGSREVSGTTVDIKRVPELMSEEALRKAGAPA-DDTPVARPEELADYDGIIFGSPTRFGNMAGQMRNFLDQTGGLWAQGKLIGKVGSVFTSTGSQHGGQETTLTSMQTTLMHHGMV 138          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SHIFL (Flavoprotein wrbA OS=Shigella flexneri GN=wrbA PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.789e-26
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SHIF8 (Flavoprotein wrbA OS=Shigella flexneri serotype 5b (strain 8401) GN=wrbA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.789e-26
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ECOUT (Flavoprotein wrbA OS=Escherichia coli (strain UTI89 / UPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.789e-26
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ECOSM (Flavoprotein wrbA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.789e-26
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ECOSE (Flavoprotein wrbA OS=Escherichia coli (strain SE11) GN=wrbA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.789e-26
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
The following BLAST results are available for this feature:
BLAST of DN618433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_THICR1.047e-2644.93Flavoprotein wrbA OS=Thiomicrospira crunogena (str... [more]
WRBA_GEOUR1.047e-2643.97Flavoprotein wrbA OS=Geobacter uraniireducens (str... [more]
WRBA_SHIDS1.787e-2643.48Flavoprotein wrbA OS=Shigella dysenteriae serotype... [more]
WRBA_SALTI2.333e-2642.34Flavoprotein wrbA OS=Salmonella typhi GN=wrbA PE=3... [more]
WRBA_ALHEH3.047e-2641.61Flavoprotein wrbA OS=Alkalilimnicola ehrlichei (st... [more]
WRBA_SHIFL6.789e-2643.07Flavoprotein wrbA OS=Shigella flexneri GN=wrbA PE=... [more]
WRBA_SHIF86.789e-2643.07Flavoprotein wrbA OS=Shigella flexneri serotype 5b... [more]
WRBA_ECOUT6.789e-2643.07Flavoprotein wrbA OS=Escherichia coli (strain UTI8... [more]
WRBA_ECOSM6.789e-2643.07Flavoprotein wrbA OS=Escherichia coli (strain SMS-... [more]
WRBA_ECOSE6.789e-2643.07Flavoprotein wrbA OS=Escherichia coli (strain SE11... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02J01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002J01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618433 ID=DN618433; Name=DN618433; organism=Citrus sinensis; type=EST; length=526bp
ATACGACTTCTTAGGCTCTCCATTTTCCAATCCATTTTTTCAAACTTTTT
TTTTATATATAGAGAGAAAAGTAACAGAGACTCGTCGAAGAAGACTCCTT
AAGAGATGGCAACCAAAGTGTATATTGTGTACTATTCCATGTATGGACAT
GTAGAGAAACTGGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGG
TGTTGAAGCCAAATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTAC
TTGGTAAGATGAGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCC
AACGAACTTGCTGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATT
TGGAATGATGGCTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTC
TATGGAGGACACAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGC
ACTGGGTCACAAGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTAC
TCAGCTTGTTCACCATGGGATGATAT
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