DN618433

Overview
NameDN618433
Unique NameDN618433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALSV (Flavoprotein wrbA OS=Salmonella schwarzengrund (strain CVM19633) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALPB (Flavoprotein wrbA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALNS (Flavoprotein wrbA OS=Salmonella newport (strain SL254) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALHS (Flavoprotein wrbA OS=Salmonella heidelberg (strain SL476) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALG2 (Flavoprotein wrbA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALEP (Flavoprotein wrbA OS=Salmonella enteritidis PT4 (strain P125109) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALDC (Flavoprotein wrbA OS=Salmonella dublin (strain CT_02021853) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALAR (Flavoprotein wrbA OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SALA4 (Flavoprotein wrbA OS=Salmonella agona (strain SL483) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMV 137
[Close]
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_BURCJ (Flavoprotein wrbA OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=wrbA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 59/137 (43.07%), Postives = 77/137 (56.20%), Query Frame = 1 
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYS YGHVE +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +ELA+ D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F               +  T L+HHGM+
Sbjct:    3 KVLVLYYSSYGHVETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKVDQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMV 139
The following BLAST results are available for this feature:
BLAST of DN618433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_SALSV1.158e-2540.88Flavoprotein wrbA OS=Salmonella schwarzengrund (st... [more]
WRBA_SALPB1.158e-2540.88Flavoprotein wrbA OS=Salmonella paratyphi B (strai... [more]
WRBA_SALNS1.158e-2540.88Flavoprotein wrbA OS=Salmonella newport (strain SL... [more]
WRBA_SALHS1.158e-2540.88Flavoprotein wrbA OS=Salmonella heidelberg (strain... [more]
WRBA_SALG21.158e-2540.88Flavoprotein wrbA OS=Salmonella gallinarum (strain... [more]
WRBA_SALEP1.158e-2540.88Flavoprotein wrbA OS=Salmonella enteritidis PT4 (s... [more]
WRBA_SALDC1.158e-2540.88Flavoprotein wrbA OS=Salmonella dublin (strain CT_... [more]
WRBA_SALAR1.158e-2540.88Flavoprotein wrbA OS=Salmonella arizonae (strain A... [more]
WRBA_SALA41.158e-2540.88Flavoprotein wrbA OS=Salmonella agona (strain SL48... [more]
WRBA_BURCJ1.158e-2543.07Flavoprotein wrbA OS=Burkholderia cepacia (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02J01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002J01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618433 ID=DN618433; Name=DN618433; organism=Citrus sinensis; type=EST; length=526bp
ATACGACTTCTTAGGCTCTCCATTTTCCAATCCATTTTTTCAAACTTTTT
TTTTATATATAGAGAGAAAAGTAACAGAGACTCGTCGAAGAAGACTCCTT
AAGAGATGGCAACCAAAGTGTATATTGTGTACTATTCCATGTATGGACAT
GTAGAGAAACTGGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGG
TGTTGAAGCCAAATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTAC
TTGGTAAGATGAGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCC
AACGAACTTGCTGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATT
TGGAATGATGGCTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTC
TATGGAGGACACAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGC
ACTGGGTCACAAGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTAC
TCAGCTTGTTCACCATGGGATGATAT
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