DN618433

Overview
NameDN618433
Unique NameDN618433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_METAC (Flavoprotein wrbA OS=Methanosarcina acetivorans GN=wrbA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.369e-25
Identity = 66/145 (45.52%), Postives = 82/145 (56.55%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIIT--PNE--LAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV I++YSMYGHV ++AE +  GA  VEG E  ++QVPETLPEEVL KM A       + +P++T   NE  LA AD  +FG PTR+G M AQ +A LD  GGLW      GK   +F              LT    L+H GMI
Sbjct:    3 KVNIIFYSMYGHVYRMAEAVAAGAREVEGAEVGIYQVPETLPEEVLEKMGAIETKKLFAHIPVLTREMNEEVLAGADALIFGTPTRYGNMTAQMRAVLDGLGGLWNRDAFVGKVGSVFTSSGTQHGGQESTILTFHVTLLHLGMI 147          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ENT38 (Flavoprotein wrbA OS=Enterobacter sp. (strain 638) GN=wrbA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.747e-25
Identity = 61/137 (44.53%), Postives = 79/137 (57.66%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  I +GA+ V+GVE  + +VPET+  E   K     ++  P  TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW T  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMAHAIAEGANKVDGVEVVIKRVPETMNAEAFLKAGGKTQN-APQATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWATGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_SYNAS (Flavoprotein wrbA OS=Syntrophus aciditrophicus (strain SB) GN=wrbA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.506e-25
Identity = 61/141 (43.26%), Postives = 79/141 (56.03%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA----PPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ +VYYS YGHV +LAE + +GAS +  VE  + +VPETLPE +L K+         + VP+    EL  AD  +FG P RFG M  Q ++FLDATGGLW    L GK   +F              L+  T L+HHGMI
Sbjct:    2 KIMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFAHVPVCEVAELETADAILFGTPARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGTQHGGQESTILSFHTTLLHHGMI 142          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_RHOCS (Flavoprotein wrbA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=wrbA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.506e-25
Identity = 57/138 (41.30%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  112 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            TKV ++YYS YGH+E +A+ + +GA SV G E  + +VPE +PEEV            P+ T  ELAE D  + G PTRFG M +Q   FLD TGGLW    L GK    F               + +T L+HHGM+
Sbjct:    2 TKVLVLYYSSYGHIETMAQAVAEGARSVPGTEVAVKRVPELVPEEVARNAGMKLDQPAPVATVAELAEYDAIIVGSPTRFGRMTSQMANFLDQTGGLWAKGALNGKVGAAFTSTASQHGGQETTLFSILTNLLHHGMV 139          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_CITK8 (Flavoprotein wrbA OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=wrbA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.506e-25
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            K+ ++YYSMYGH+E +A  + +GA+ V+G E  + +VPET+  E+  K     ++  P+ TP EL + D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGANKVDGAEVVIKRVPETMQPEIFAKAGGKTQN-APVATPQELPDYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_PARL1 (Flavoprotein wrbA OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=wrbA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.803e-25
Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  112 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            TKV ++Y+S YGH+E LA+ + +GA+S  G E  L +VPET+P + +       + + P+ TP EL + D  +FG PTRFG M  Q + FLD TGGLW    L GK  G  +              +  T L HHGM+
Sbjct:    5 TKVLVLYHSSYGHIETLAKAVAEGAASQAGTEVLLKRVPETMPADAMANAGMKVEQEAPVATPQELGDYDAVIFGTPTRFGNMTGQMRTFLDQTGGLWAKGALVGK-VGSVFTSTGTGGGNETTITSFHTNLFHHGMV 141          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_GEOLS (Flavoprotein wrbA OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=wrbA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.803e-25
Identity = 62/142 (43.66%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  112 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            +K+ IV+YSMYGH+  +AE +  G  SV G  A+L QVPE + EEVL K  A       + +P  T   LAEAD  +FG PTRFG MAAQ + FLD TG LW +  L GK   +F               +  + L+HHGMI
Sbjct:    2 SKIQIVFYSMYGHIHTMAEAVADGVRSVGGCSAELLQVPELISEEVLEKYGAKAARAAFAHIPTATVERLAEADAIIFGTPTRFGNMAAQMRNFLDQTGKLWLSGGLVGKVGSVFASTATQHGGQETTITSFHSTLLHHGMI 143          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ECO5E (Flavoprotein wrbA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.803e-25
Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+  ++  K     ++  P+ TP ELA  D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMSPQLFEKAGGKTQT-APVATPQELANYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ECO57 (Putative flavoprotein wrbA OS=Escherichia coli O157:H7 GN=wrbA PE=5 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 9.803e-25
Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+  ++  K     ++  P+ TP ELA  D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMSPQLFEKAGGKTQT-APVATPQELANYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMV 137          
BLAST of DN618433 vs. ExPASy Swiss-Prot
Match: WRBA_ACICJ (Flavoprotein wrbA OS=Acidiphilium cryptum (strain JF-5) GN=wrbA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.280e-24
Identity = 58/137 (42.34%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  115 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMI 525
            KV ++YYS +GHVE +A+ + +GA +  G E  L +VPET+PE+    + A    D P+ TP ELA+ D  +FG PTRFG M  Q + FLD TGGLW    L GK   +F               +  T L HHGMI
Sbjct:    3 KVLVLYYSTWGHVETMAKAVAEGAKAA-GAEVTLKRVPETMPEDTAKAIHAKTDQDAPVATPAELADYDAIIFGTPTRFGNMCGQMRNFLDQTGGLWAKGALIGKVGSVFASTGTQHGGQETTITSFHTTLFHHGMI 138          
The following BLAST results are available for this feature:
BLAST of DN618433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_METAC3.369e-2545.52Flavoprotein wrbA OS=Methanosarcina acetivorans GN... [more]
WRBA_ENT385.747e-2544.53Flavoprotein wrbA OS=Enterobacter sp. (strain 638)... [more]
WRBA_SYNAS7.506e-2543.26Flavoprotein wrbA OS=Syntrophus aciditrophicus (st... [more]
WRBA_RHOCS7.506e-2541.30Flavoprotein wrbA OS=Rhodospirillum centenum (stra... [more]
WRBA_CITK87.506e-2540.88Flavoprotein wrbA OS=Citrobacter koseri (strain AT... [more]
WRBA_PARL19.803e-2539.86Flavoprotein wrbA OS=Parvibaculum lavamentivorans ... [more]
WRBA_GEOLS9.803e-2543.66Flavoprotein wrbA OS=Geobacter lovleyi (strain ATC... [more]
WRBA_ECO5E9.803e-2542.34Flavoprotein wrbA OS=Escherichia coli O157:H7 (str... [more]
WRBA_ECO579.803e-2542.34Putative flavoprotein wrbA OS=Escherichia coli O15... [more]
WRBA_ACICJ1.280e-2442.34Flavoprotein wrbA OS=Acidiphilium cryptum (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02J01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002J01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618433 ID=DN618433; Name=DN618433; organism=Citrus sinensis; type=EST; length=526bp
ATACGACTTCTTAGGCTCTCCATTTTCCAATCCATTTTTTCAAACTTTTT
TTTTATATATAGAGAGAAAAGTAACAGAGACTCGTCGAAGAAGACTCCTT
AAGAGATGGCAACCAAAGTGTATATTGTGTACTATTCCATGTATGGACAT
GTAGAGAAACTGGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGG
TGTTGAAGCCAAATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTAC
TTGGTAAGATGAGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCC
AACGAACTTGCTGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATT
TGGAATGATGGCTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTC
TATGGAGGACACAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGC
ACTGGGTCACAAGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTAC
TCAGCTTGTTCACCATGGGATGATAT
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