CX046805

Overview
NameCX046805
Unique NameCX046805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_CHLRE (Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 53/137 (38.69%), Postives = 78/137 (56.93%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M+SEVD +G+G I     +  +     E   E EL+E F  FD D +G I+A EL  V T LG++L + ++   MI   D +GDG V +E+F RMM
Sbjct:   15 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMISEVDADGNGTIDFPEFLMLMARKMKETDHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKL-SEEEVDEMIREADVDGDGQVNYEEFVRMM 149          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_BLAEM (Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE=3 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E+  M++EVD +G+G I     ++ +     +   E E+KE F  FD D +G I+A EL  V T LG++L + D+   MI   D +GDG + +E+F +MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELLVMINEVDADGNGTIDFPEFLTMMARKMKDSDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKL-SEDEVEEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +++F ++M
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVEEMIREADVDGDGQINYDEFVKVM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+ +++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MAZZLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +GDG I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 50/137 (36.50%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++E+D +G+G I     ++ +     +   E EL E F  FD D DG I+A+EL  V T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKL-TNEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 50/137 (36.50%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++E+D +G+G I     ++ +     +   E EL E F  FD D DG I+A+EL  V T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKL-TNEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 50/137 (36.50%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD++G G I     ++ +     +   E E+KE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM5_SOLTU (Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +++F ++M
Sbjct:    1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYDEFVKVM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM2_PETHY (Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M+SEVD + +G I     ++ +     +   E ELKE F  FD D +G I+A ++  V T LG++L T ++   MI   D +GDG V +E+F RMM
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKL-TDEEVDEMIREADMDGDGQVNYEEFVRMM 146          
The following BLAST results are available for this feature:
BLAST of CX046805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
CALM_CHLRE8.035e-1738.69Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2[more]
CALM_BLAEM8.035e-1734.46Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE... [more]
CALM3_ORYSJ8.035e-1734.46Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM_SPIOL1.049e-1634.46Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_PYUSP1.049e-1635.14Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALM_PLAFA1.049e-1636.50Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF71.049e-1636.50Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_EUGGR1.049e-1636.50Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM5_SOLTU1.049e-1634.46Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE... [more]
CALM2_PETHY1.049e-1635.14Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10C10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10C10-F19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046805 ID=CX046805; Name=CX046805; organism=Citrus sinensis; type=EST; length=829bp
CTTCTCTTTCCTCTTTTCCCCTTCACGAGAAACTCGAATTCGTCTTTTCT
TTCTTCGCGTTTCGGAAATGAAACTCATCGAGAAGCTCAGCCCGAAACGT
CTCTTCCGGTCCAAGTCCAAGAAGGACCGGACCAGCGTTTCGCGTTCTGA
CCCATCATCGTTCAGCTCGTCCTCTACCTCCGACTCGTCCACCCACAACA
AACTCGGTTCGGCGCCGGACAGAGTCGGGACGCCAACGAGTGTCTTACAC
GAGATATCGGGTGACTGGTCCGACATGTCGGCCGATATCTCGCTAGATAT
GAACTACGAGCTCGTCCAGGCGTGTAAGTTGCTCGACAGGGACAACGACG
GGGTGGTGTTGAGAAGCGAGCTGGAGGCGCTCTTGATCCGGCTCGGAGCG
GACCCGCCGACCCAAGAGGAGGTCAAGTCGATGCTGAGCGAGGTGGATCG
GGAGGGCGACGGGTATATACCCTTGGAGGCGCTGATTAGCCGGGTCGGGA
ACTCGTCCTGCGAGCCGGCTTGTGAACCGGAGCTCAAGGAGACGTTTGAC
TTCTTTGACGCGGATCACGATGGTAAGATCACGGCCGAGGAGTTGTTCGG
TGTTTTCACCAAATTAGGGGACGAGCTGTGCACGTTAGACGACTGCCGGG
GCATGATAGCGCTGGTGGATAAAAACGGGGATGGGTTCGTCTGCTTCGAG
GACTTTTCAAGGATGATGGAGTTGCAGAGATGATCGTGATTATATTGTTA
TCTATACATAAATCAATATGTTTTTAAAACACCCCGTGATGATAATGATG
ATCATGTGNATATGTTTCCTCCTCTTGAT
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