CX046804

Overview
NameCX046804
Unique NameCX046804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM2_SOYBN (Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIKEADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX046804 vs. ExPASy Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = -3 
Query:  332 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 775
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146
The following BLAST results are available for this feature:
BLAST of CX046804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CALM_HORVU5.464e-1735.14Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_EUPCH5.464e-1735.14Calmodulin OS=Euphorbia characias PE=2 SV=4[more]
CALM_BRYDI5.464e-1735.14Calmodulin OS=Bryonia dioica PE=2 SV=2[more]
CALM7_ARATH5.464e-1735.14Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ... [more]
CALM2_SOYBN5.464e-1735.14Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2[more]
CALM2_ARATH5.464e-1735.14Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 P... [more]
CALM1_PETHY5.464e-1735.14Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2[more]
CALM1_ORYSJ5.464e-1735.14Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI5.464e-1735.14Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM1_DAUCA5.464e-1735.14Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10C10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10C10-F19-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046804 ID=CX046804; Name=CX046804; organism=Citrus sinensis; type=EST; length=777bp
TTTTTTTTTTTTTTTTTCCCAAAATCTTTAAAATATCATTATCATGAAAG
CAACAATCACCCAATCTCTCGATGTGATCAACTGATCGCTGATCAAAATT
ATTCTTATGCGCCAAATAACAATAATAATAAAAATAAAAGAAAAATAAAA
CATTAGCAAATATATATAAATAATAATAATAATAATCAAGGAAAAAATTA
ACCGACTTTGGTTTTATACGATCAAGAGGAGGAAACATAATCACATGATC
ATCATTATCATCACGGGGTGTTTTAAAAACATATTGATTTATGTATAGAT
AACAATATAATCACGATCATCTCTGCAACTCCATCATCCTTGAAAAGTCC
TCGAAGCAAACAAACCCATCCCCGTTTTTATCCACCAGCGCTATCATGCC
CCGGCAGTCGTCTAACGTGCACAGCTCGTCCCCTAATTTGGTGAAAACAC
CGAACAACTCCTCGGCCGTGATCTTACCATCGTGATCCGCGTCAAAAAAG
TCAAACGTCTCCTTGAGCTCCGGTTCACAAGCCGGCTCGCAGGACGAGTT
CCCGACCCGGCTAATCAGCGCCTCCAAGGGTATATACCCGTCGCCCTCCC
GATCCACCTCGCTCAGCATCGACTTGACCTCCTCTTGGGTCGGCGGGTCC
GCTCCGAGCCGGATCAAGAGCGCCTCCAGCTCGCTTCTCAACACCACCCC
GTCGTTGTCCCTGTCGAGCAACTTACACGCCTGGACGAGCTCGTAGTTCA
TATCTAGCGAGATATCGGCCGACATGT
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