DN618428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618428 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12 Identity = 42/143 (29.37%), Postives = 64/143 (44.76%), Query Frame = -2 Query: 179 ETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLP--EEIYAPKMVACHSMPYPYAVFYCHYQESENKLFQVSLTGENGVRVE-AAAVCHMDTSQWNRDHASFRVLKIKPGTSPVCHFLPVDNLVW 598 ETK C S E M+DF V G + T + + I K+ K V+CH YPY ++YCH L ++ ++ A+CHMDTS W +H +F +L +PG VCH++ +++ W Sbjct: 483 ETKRCVGSAEDMIDFATSVLGRSVVLR-------TTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNW 618
BLAST of DN618428 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = -2 Query: 179 ETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLPEEIYAPKMVACHSMPYPYAVFYCHYQESENKLFQVSLTGENGVRV--EAAAVCHMDTSQWNRDHASFRVLKIKPGTSPVCHFLPVDNLVW 598 ETK C S E M+DF V G ++ T TN GN + +K K V+CH YP ++YCH + ++++ + N A+CH+DTS W H +F L PG VCH++ +++ W Sbjct: 493 ETKQCVNSAEDMIDFATSVLGRNV---VVRTTENTNGSKGNIMIGS--IKGINGGKVTKSVSCHQTLYPSLLYYCH-SVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWIFENDMTW 628
BLAST of DN618428 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = -2 Query: 179 ETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLPEEIYAPKMVACHSMPYPYAVFYCHYQESENKLFQVSLTGENGVRV--EAAAVCHMDTSQWNRDHASFRVLKIKPGTSPVCHFLPVDNLVW 598 ETK C S E M+DF V G ++ T TN GN + +K K V+CH YP ++YCH + ++++ + N A+CH+DTS W H +F L PG VCH++ +++ W Sbjct: 490 ETKQCVNSAEDMIDFATSVLGRNV---VVRTTENTNGSKGNIMIGS--IKGINGGKVTKSVSCHQTLYPSLLYYCH-SVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTW 625
BLAST of DN618428 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.662e-11 Identity = 39/141 (27.66%), Postives = 68/141 (48.23%), Query Frame = -2 Query: 179 ETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLPEEIYAPKMVACHSMPYPYAVFYCHYQESENKLFQVSLTGENGVRVE-AAAVCHMDTSQWNRDHASFRVLKIKPGTSPVCHFLPVDNLVW 598 ETK CATS E ++DF + G + I+ + + G ++ + + + + V+CH +PY V+YCH + ++ ++ A+CH+DTS W+ H +F L KPG VCH++ ++ W Sbjct: 488 ETKRCATSAEDIVDFAVEMLGND----IVVRSTASTAGSGGQIRLGNVTGV-DGGKVTRSVSCHQSLFPYLVYYCHSVPKVRVYEADIMAADSDQKINHGVAICHLDTSDWSPTHGAFIALGGKPGEVEVCHWIFEGDMTW 623
BLAST of DN618428 vs. ExPASy Swiss-Prot
Match: BURP4_ORYSJ (BURP domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=BURP4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = -2 Query: 176 CATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPLQNYTILKLP-EEIYAPKMVACHSMPYPYAVFYCHYQESENKLFQVSLTGENGVRV---EAAAVCHMDTSQWNRDHASFRVLKIKPGTSPVCHFLPVDNLVWV 586 CATS E++LDF G +T + G + Y + I +VACH MPY Y V+YCH + ++ +V L V + A AVCH++T+ W D A F +LK G + +CH++P ++W+ Sbjct: 347 CATSREAVLDFAASALGTSA------PRAVTTLVHGREPRRYVVAADGVARIGGDAVVACHPMPYLYEVYYCH-RPADAVALRVDLHAVADVGLGGATAVAVCHVNTTTW--DSAYFELLKASRGDA-ICHYMPQGYVLWL 477 The following BLAST results are available for this feature:
BLAST of DN618428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618428 ID=DN618428; Name=DN618428; organism=Citrus sinensis; type=EST; length=599bpback to top |