DN618426

Overview
NameDN618426
Unique NameDN618426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.036e-41
Identity = 83/169 (49.11%), Postives = 116/169 (68.64%), Query Frame = 2
Query:   98 PAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYEFGF 604
            P  +QL  + YCI S P W E ++L FQHYIVMLGTTVLI  +LV  MGG   +KA+VIQT+LF++G+NTLLQ+L GTRLP VMG S+ +V   +SII       +  +  ++F+ TMR +QGSLI++S + I++G+   W N+ R  SP+ VVP++ +V  GL+  GF
Sbjct:   36 PPAEQLHHLQYCIHSNPSWHETVVLAFQHYIVMLGTTVLIANTLVSPMGGDPGDKARVIQTILFMSGINTLLQTLIGTRLPTVMGVSFAYVLPVLSIIRDYNNGQFDSEK-QRFRHTMRTVQGSLIISSFVNIIIGYGQAWGNLIRIFSPIIVVPVVSVVSLGLFLRGF 203          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 4.255e-31
Identity = 70/185 (37.84%), Postives = 105/185 (56.76%), Query Frame = 2
Query:   62 GAAPKADEPLPHPAKDQLPS----ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYEFGF 604
            G   +  E LP    D L +    + Y +   P        G QHY+ MLG+ +L+P  +VP MGG +EE A V+ T+LFV+G+ TLL + FG+RLP + G S+ F+   ++II +  F   +G+    FK  MR +QG++I+ S  Q VLG+SGL   + R ++P+ V P +  VG   Y +GF
Sbjct:  145 GRIEETVEVLPQSMDDDLVARNLHMKYGLRDTPGLVPIGFYGLQHYLSMLGSLILVPLVIVPAMGGSHEEVANVVSTVLFVSGITTLLHTSFGSRLPLIQGPSFVFLAPALAIINSPEFQGLNGN--NNFKHIMRELQGAIIIGSAFQAVLGYSGLMSLILRLVNPVVVAPTVAAVGLSFYSYGF 327          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28
Identity = 65/182 (35.71%), Postives = 100/182 (54.95%), Query Frame = 2
Query:   59 GGAAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYEFGF 604
            GG     D   P P       + + +   P +   I  G QHY+ ++G+ V IP  +VP M G +++ A VI T+L + G+ T+L   FGTRLP V G S+ ++   + +I +  F N +     KF+ TMR +QG++IV S  Q +LGFSGL   + RF++P+ V P +  VG   + +GF
Sbjct:  159 GGGESSEDGQWPKPIL-----MKFGLRDNPGFVPLIYYGLQHYLSLVGSLVFIPLVIVPAMDGSDKDTASVISTMLLLTGVTTILHCYFGTRLPLVQGSSFVYLAPVLVVINSEEFRNLT---EHKFRDTMRELQGAIIVGSLFQCILGFSGLMSLLLRFINPVVVAPTVAAVGLAFFSYGF 332          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.050e-17
Identity = 50/174 (28.74%), Postives = 93/174 (53.45%), Query Frame = 2
Query:  110 QLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKA--KVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF---------SNYSGDPVEK-FKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYE 595
            Q   + Y I   PPW   I LG QHY+     T+ +P  L   M  G+++ A  ++I T+ F  G+ TLLQ+ FG RLP     ++ F+    +I+   ++         +N + + +E  +   ++ IQG++I++S +++V+G  GL   + R++ PL++ P + L+G   ++
Sbjct:   84 QRSDMIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGDDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWKCNTTEITVANGTAELLEHIWHPRIQEIQGAIIMSSLIEVVIGLLGLPGALLRYIGPLTITPTVALIGLSGFQ 257          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.050e-17
Identity = 50/174 (28.74%), Postives = 93/174 (53.45%), Query Frame = 2
Query:  110 QLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKA--KVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF---------SNYSGDPVEK-FKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYE 595
            Q   + Y I   PPW   I LG QHY+     T+ +P  L   M  G+++ A  ++I T+ F  G+ TLLQ+ FG RLP     ++ F+    +I+   ++         +N + + +E  +   ++ IQG++I++S +++V+G  GL   + R++ PL++ P + L+G   ++
Sbjct:   85 QRSDMIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGDDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWKCNTTEITVANGTAELLEHIWHPRIQEIQGAIIMSSLIEVVIGLLGLPGALLRYIGPLTITPTVALIGLSGFQ 258          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17
Identity = 55/194 (28.35%), Postives = 96/194 (49.48%), Query Frame = 2
Query:   56 AGGAAPKADEPLP-HPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK--AKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPV-----------EKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYE 595
            AG +      PLP  P  D L    Y I   PPW   ILLGFQHY+     T+ +P  L   +  G ++   +++I T+    G+ TL+Q+  G RLP     ++ F+    SI+   R+   S + +             +   +R +QG+++V+S +++V+G  GL   +  ++ PL+V P + L+G  +++
Sbjct:   19 AGTSTRDRQAPLPTEPKFDML----YKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGRDQHMVSQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKSILALERWKCPSEEEIYGNWSMPLNTSHIWHPRIREVQGAIMVSSMVEVVIGLMGLPGALLSYIGPLTVTPTVSLIGLSVFQ 208          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.965e-17
Identity = 51/185 (27.57%), Postives = 96/185 (51.89%), Query Frame = 2
Query:   80 DEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK--AKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGR---------FSNYSG--DPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYE 595
            D+  P PA+ +   + Y I   PPW   ILLGFQHY+     T+ +P  L   +  G ++   +++I T+    G+ TL+Q+  G RLP     ++ F+    +I+   R         + N+S   +    +   +R +QG+++V+S +++V+G  GL   +  ++ PL+V P + L+G  +++
Sbjct:   25 DQQAPLPAEPKFDML-YKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGRDQHMISQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSMPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQ 208          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16
Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = 2
Query:  128 YCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKA--KVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGD-----------PVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYE 595
            Y +   PPW   I LG QHY+     TV +P  L   M  G ++ A  ++I T+ F  G+ TL Q+ FG RLP     ++ F+    +I+   ++   + D               +   +R IQG++I++S +++V+GF GL   + +++ PL++ P + L+G   ++
Sbjct:   90 YTVEDVPPWYLCIFLGLQHYLTCFSGTVAVPFLLAEAMCVGFDQWATSQLIGTIFFCVGITTLFQTTFGCRLPLFQASAFAFLAPARAILSLEKWKCNTTDLSITNGTELLHTEHIWYPRIREIQGAIIMSSLIEVVIGFLGLPGALLKYIGPLTITPTVSLIGLSGFQ 258          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16
Identity = 50/176 (28.41%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  110 QLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKA--KVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDP-----VEKFKRT-------MRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYE 595
            Q   + Y I   PPW   I LG QHY+     T+ +P  L   M  G ++ A  ++I T+ F  G+ TLLQ+ FG RLP     ++ F+    +I+   ++   + D        +   T       +R IQG++I++S +++V+G  GL   + +++ PL++ P + L+G   ++
Sbjct:   85 QRSDMIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGYDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWKCNTTDVSVANGTAELLHTEHIWYPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQ 260          
BLAST of DN618426 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16
Identity = 53/184 (28.80%), Postives = 95/184 (51.63%), Query Frame = 2
Query:   86 PLP-HPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK--AKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGR---------FSNYSG--DPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLIYLVGFGLYE 595
            PLP  P  D L    Y I   PPW   ILLGFQHY+     T+ +P  L   +  G+++   +++I T+    G+ TL+Q+  G RLP     ++ F+    +I+   R         + N+S   +    +   +R +QG+++V+S +++V+G  GL   +  ++ PL+V P + L+G  +++
Sbjct:   22 PLPTEPKFDML----YKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGHDQHMVSQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSLPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLNYIGPLTVTPTVSLIGLSVFQ 201          
The following BLAST results are available for this feature:
BLAST of DN618426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAT3_ARATH2.036e-4149.11Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT12_ARATH4.255e-3137.84Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT11_ARATH4.403e-2835.71Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]
S23A2_RAT2.050e-1728.74Solute carrier family 23 member 2 OS=Rattus norveg... [more]
S23A2_MOUSE2.050e-1728.74Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A1_MOUSE2.678e-1728.35Solute carrier family 23 member 1 OS=Mus musculus ... [more]
S23A1_RAT5.965e-1727.57Solute carrier family 23 member 1 OS=Rattus norveg... [more]
S23A2_XENTR2.267e-1628.40Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
S23A2_HUMAN2.267e-1628.41Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A1_HUMAN2.267e-1628.80Solute carrier family 23 member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618426 ID=DN618426; Name=DN618426; organism=Citrus sinensis; type=EST; length=604bp
AGATTGTTAAAACTTGAAAAAGCTAACCTTTTAGAGAGAGAAAAGCAAGA
TCATGGCCGGAGGTGCAGCGCCTAAAGCTGATGAGCCGCTTCCACACCCA
GCGAAGGATCAACTACCAAGCATTTCTTATTGCATTACTAGTCCTCCTCC
ATGGCCCGAAGCTATTCTTCTTGGTTTTCAACACTACATTGTTATGCTTG
GCACAACGGTTCTCATTCCAACTTCTCTTGTTCCTCAGATGGGAGGTGGA
AATGAGGAGAAAGCAAAGGTGATCCAGACATTGCTTTTTGTTGCTGGTTT
GAACACATTGCTGCAGTCATTGTTTGGGACTCGATTACCTGCAGTTATGG
GAGGGTCTTACACTTTCGTCCCTTCTACAATTTCAATCATCCTTGCTGGT
CGATTCAGTAATTATTCTGGAGATCCTGTTGAGAAATTCAAGAGAACTAT
GCGGGCAATACAGGGTTCTCTCATTGTTGCTTCTACTCTTCAGATTGTCC
TAGGCTTCAGTGGGCTTTGGCGTAATGTTACAAGGTTTTTAAGTCCACTC
TCAGTGGTTCCTTTGATTTACCTAGTTGGTTTTGGGCTGTACGAGTTTGG
TTTT
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