DN618424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.406e-16 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 3 Query: 105 RDVCIVGVARTPMGGFLG------TLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 +DV IV RTPMG G LSA + SI L+ N+DP+ ++++++G V G AR AAL AGI V TVN++C S ++A+ AS++IQ+G D+ + GG+E M + P + GM MG AE+ + H I+R+ QD+FA +S Sbjct: 2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMSSIL----LRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVPMSHGVDFHPGMAKSVAKASGM-------------MGLTAEMLGKLHGISRQQQDEFAARS 172
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 59/188 (31.38%), Postives = 93/188 (49.47%), Query Frame = 3 Query: 93 SIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 S+ PRDV ++ R+PMG G ++ A L + I+A R + VDP+ V+++ +G V + G ARQ +L I ++ TVN++C S + AI A+Q+I G DV V GG+E M + P + + + M MG AE+ A+ H I+R+ QD+F +S Sbjct: 2 SLNPRDVVVIDCVRSPMGRAKAGCFRNVRAETLSATLIDALFDRNDKVDPAEVEDLIWGCVNQTLEQGFNVARQISLLTRIPHTSSAQTVNRLCGSAMSAIHTAAQAIMTGNGDVFVVGGVEHMGHVPMTQGFDHNPAASKYSAKASNM-------------MGLTAEMLAKMHGISRQQQDEFGARS 176
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 60/184 (32.61%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 105 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 +DV IV RTPMG G ++ A L + +++ L R N+DP+ ++++++G V G AR AAL AGI V TVN++C S ++A+ AS++IQ+G D+ + GG+E M + P + GM MG AE+ + H I+R+ QD+FA +S Sbjct: 2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMKSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVPMSHGVDFHPGMAKSVAKASGM-------------MGLTAEMLGKLHGISRQQQDEFAARS 172
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.516e-16 Identity = 65/191 (34.03%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 93 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 S+ PRDV IV RTPMG G + + A + + I L+R VDP+ V++V +G V + G AR A+L I ++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L+ MG AE+ + H ITRE QD F V+S Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRS 176
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 62/185 (33.51%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 105 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 + IV RTPMG G ++ A L + ++A L R +DP+ +++V +G V G AR AAL AGI TVN++C S ++AI A+++I G+ D + GG+E M + P G H L + K G+ MG AE+ + H ITR+ QD+FAV+S Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVGGVEHMGHVP-----MNHGVDF-HPGLATNVAKASGM--------MGLTAEMLGKMHGITRQQQDEFAVRS 172
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 105 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 ++V IV RTPMG G A L + ++ L+R NVDP+ ++++++G V G AR A+L AG+ S+ TTVN++C S ++A+ AS++I +G D+ + GG+E M + P + + GM MG AE+ + H I+RE QD FA S Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLERNPNVDPNQIEDIYWGCVQQTLEQGFNIARNASLLAGLPKSIAATTVNRLCGSSMQALHDASRAIMVGDADICIIGGVEHMGHVPMNHGVDFHSGLSKNVAKASGM-------------MGLTAEMLGKMHGISREQQDAFAFAS 172
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 93 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 S+ PRDV IV RTPMG G + + A + + I L+R + VDP V++V +G V + G AR A+L I ++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F V+S Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRS 176
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 64/191 (33.51%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 93 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 S+ PRDV IV RTPMG G + + A + + I L+R VDP V++V +G V + G AR A+L I ++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F ++S Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRS 176
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 64/191 (33.51%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 93 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 S+ PRDV IV RTPMG G + + A + + I L+R VDP V++V +G V + G AR A+L I ++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F ++S Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRS 176
BLAST of DN618424 vs. ExPASy Swiss-Prot
Match: FADA_PSEE4 (3-ketoacyl-CoA thiolase OS=Pseudomonas entomophila (strain L48) GN=fadA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 93 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGILNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVQS 647 S+ PRDV IV RTPMG G + + A + + I L+R + +DP V++V +G V + G AR A+L I ++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F V+S Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKIDPKEVEDVIWGCVNQTMEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRS 176 The following BLAST results are available for this feature:
BLAST of DN618424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618424 ID=DN618424; Name=DN618424; organism=Citrus sinensis; type=EST; length=648bpback to top |