CX046786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_TRYBB (Structure-specific endonuclease subunit SLX1 homolog OS=Trypanosoma brucei brucei GN=Tb927.3.1220 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 46/125 (36.80%), Postives = 75/125 (60.00%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKR-RPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKY 518 F YLLTSL P+ +G YIG+TVNP RR+RQHNGE+ GA RTK+ RPW +++C+ GF + AL+FEW WQ+P +S ++ + + + + + + +L + + ++ F ++ Sbjct: 5 FHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHNGELVNGARRTKRNGRPWLLLMCVSGFGEDRIALKFEWCWQNPSKSTRLKSHVSQLRCVHKLTHAVGVLLLLLRTELFSRLQLTLHIFDREH 129
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_SCHJY (Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=slx1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.909e-19 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMES 380 F+ CYLL S + YIG T +P RR+RQHNGEI+ GA +TK+ RPW++ ++GFPT ++ALQFEW WQHP + Sbjct: 2 FYCCYLLVSEKAASRS-VYIGSTPDPARRLRQHNGEIKGGAYKTKRSRPWKVACFVHGFPTKIAALQFEWVWQHPQST 78
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_CRYPV (Structure-specific endonuclease subunit SLX1 homolog OS=Cryptosporidium parvum GN=cgd2_4280 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.707e-19 Identity = 49/133 (36.84%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 156 CYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFS----------------GVANKIKLAFTMLNLPNWESFNIKVNYF 506 CY L S K +YIG++VNP RR+RQHNGEI+ GA +TK PW + +C+ GFP V+AL+FEWAWQHP R ++K + ++ + M L W++ N+ V F Sbjct: 10 CYFLLSEAK--KKASYIGYSVNPCRRLRQHNGEIKKGAKKTKSGVPWNLGICVGGFPDRVAALRFEWAWQHPNICKVTRDNIESWKIVKTKKTSENKRILNKRQWSIQQRVSILLCMTTLEPWKNMNLTVFVF 140
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_CANGA (Structure-specific endonuclease subunit SLX1 OS=Candida glabrata GN=SLX1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.137e-18 Identity = 51/129 (39.53%), Postives = 78/129 (60.47%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKK--RRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESFNIKVNYFSTK 515 F+ CYLL S+ R YIG T NP RR+RQHNG + R GA RTK+ RPWEMV +YGFP+ ++ALQFE AWQH ++ ++ K+ G + +K+ + ++L + ++ +++F+ K Sbjct: 10 FYGCYLLQSISKRQS--FYIGSTPNPVRRLRQHNGSLSRGGAYRTKRDGTRPWEMVAIVYGFPSRIAALQFEHAWQHGYQTRYIKSQDRVVKTRKGGRSIHHKLAMITSLLKNEYFRYMDLTLHFFNQK 136
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_CAEBR (Structure-specific endonuclease subunit SLX1 homolog OS=Caenorhabditis briggsae GN=giyd-1 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.137e-18 Identity = 50/145 (34.48%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 147 FFACYLLTSLCPR--FKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQ-AAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHMKVQ 569 F+ Y L S R +K YIG+TV+P RRI QHNG + GA +T R PW+MV ++GFP +V+AL+FEWAWQ+P S ++++ + + A ++++A ++N + F + + +TK + P H+K++ Sbjct: 167 FYGVYCLISRSERQCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVHGFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKETPFAYQLRIACELMNSEAFSRFALTFRWLNTKEELPFPISCTPPNHVKLR 311
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_DROGR (Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila grimshawi GN=GH19497 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.940e-18 Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 147 FFACYLLTS--LCPRFKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMES--------LAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFSTKYSKHSSSCPSLPEHMKV 566 F+ YLL S L R++G Y+GFTVNP+RRI QHN G GA +T ++ PW+MV+ ++GFP N++ALQFEWAWQ P S L +Q T ++ ++ ML + W + V + ++ + LP H+++ Sbjct: 17 FYGVYLLCSQSLDARYRGKCYVGFTVNPKRRIGQHNRGCDFGGAHKTSRKGPWQMVMIVHGFPNNIAALQFEWAWQQPALSTRLKCYPELRRKQPRETHFDYN-----FRIVNRMLGIGPWHRLPLTVRWLESECER--GFVVPLPPHVRI 160
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_VANPO (Structure-specific endonuclease subunit SLX1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SLX1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18 Identity = 57/131 (43.51%), Postives = 76/131 (58.02%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKKR--RPWEMVLCIYGFPTNVSALQFEWAWQH-------PMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFS 509 F+ CYLL S+ K YIG T NP RR+RQHNG + GA RTK+ RPWEMVL +YGF + ++ALQFE AWQH PM+ ++ A S V +K+ L +L + N+KV++FS Sbjct: 21 FYCCYLLQSI--NKKQSFYIGSTPNPVRRLRQHNGNLSNGGAYRTKREGTRPWEMVLVVYGFTSKIAALQFEHAWQHGYKTHYIPMDDRIMKNA----NSGRTVHHKLGLVRQLLANVYFRHMNLKVHFFS 145
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_SCHPO (Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces pombe GN=slx1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNYFS-TKYSK 524 F+ CYLL S + G YIG T +P RR+RQHNGEI GA +TK RPW + +YGFP VSAL+FEW WQ+ S + K + +K +++ W + + + + + T +SK Sbjct: 6 FYCCYLLKSNRTQSSGAVYIGSTPDPPRRLRQHNGEIVGGASKTKHGRPWSISCLVYGFPNKVSALKFEWNWQNLGISRYTKDCDFRSKKQKTIMYCLKGLKHLVDSDTWRRWPLNITFLNKTAFSK 132
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_CAEEL (Structure-specific endonuclease subunit SLX1 homolog OS=Caenorhabditis elegans GN=giyd-1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.658e-17 Identity = 51/146 (34.93%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 147 FFACYLLTSLCPR--FKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQ-AAATFKSFSGVANKIKLAFTMLNLPNWESFNIKVNY-FSTKYSKHSSSCPSLPEHMKVQ 569 F+ Y L S R +K YIG+TV+P RRI QHNG + GA +T R PW+MV ++GFP +V+AL FEWAWQ+P+ S ++++ + + A ++++A ++N + F + + +T+ +SC P+H K++ Sbjct: 172 FYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWDMVCVVHGFPNHVAALHFEWAWQNPLVSKSLKEKQLRKERKETPFAFQLRIACELMNSSAFCRFALTFRWLITTEELPFPTSCVP-PDHTKLR 316
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_YEAS6 (Structure-specific endonuclease subunit SLX1 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SLX1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.778e-17 Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESFNIKVNYFSTK 515 F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ + GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ N+ V+ F+ K Sbjct: 13 FYCCYLLQSINKRQS--FYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMNLIVDVFNIK 139 The following BLAST results are available for this feature:
BLAST of CX046786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046786 ID=CX046786; Name=CX046786; organism=Citrus sinensis; type=EST; length=844bpback to top |