CX046786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_YEAS1 (Structure-specific endonuclease subunit SLX1 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SLX1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.778e-17 Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESFNIKVNYFSTK 515 F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ + GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ N+ V+ F+ K Sbjct: 13 FYCCYLLQSINKRQS--FYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMNLIVDVFNIK 139
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_ASHGO (Structure-specific endonuclease subunit SLX1 OS=Ashbya gossypii GN=SLX1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.778e-17 Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKKR--RPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESFNIKVNYFS 509 F+ CYLL S+ R YIG T NP RR+RQHNG + + GA RTK++ RPWE+ + GFP+ ++ALQFE AWQHP ++ ++ K G + ++ + +L+ P ++ ++ V+ FS Sbjct: 13 FYCCYLLRSIPKRLS--YYIGSTPNPVRRLRQHNGLLTKGGAYRTKRQGTRPWELAASVSGFPSKIAALQFEHAWQHPYQTRFIKSEDRIVKKKGGGRSIHQRLAVLKLLLHHPFFKVMSLVVHLFS 137
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_YEAST (Structure-specific endonuclease subunit SLX1 OS=Saccharomyces cerevisiae GN=SLX1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.240e-17 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESFNIKVNYFSTK 515 F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ + GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ N+ V F+ K Sbjct: 13 FYCCYLLQSINKRQS--FYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMNLIVEVFNIK 139
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_YEAS7 (Structure-specific endonuclease subunit SLX1 OS=Saccharomyces cerevisiae (strain YJM789) GN=SLX1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.240e-17 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCG-AVRTKK--RRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAATFKSFSG---VANKIKLAFTMLNLPNWESFNIKVNYFSTK 515 F+ CYLL S+ R Y+G T NP RR+RQHNG++ G A RTK+ RPWEM++ + GFP+ ++ALQFE AWQH ++ + + K +G + +K+ L +L ++ N+ V F+ K Sbjct: 13 FYCCYLLQSINKRQS--FYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMNLIVEVFNIK 139
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_USTMA (Structure-specific endonuclease subunit SLX1 OS=Ustilago maydis GN=SLX1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.150e-17 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHP 371 F+ACY L SL G TYIG T P RR RQHNG + GA +T + RPWEM +YGF + ++ALQFEWAW P Sbjct: 13 FYACYFLRSLST--PGTTYIGSTPAPPRRKRQHNGHLTQGAYKTSRARPWEMECIVYGFSSKIAALQFEWAWAKP 85
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_BOTFB (Structure-specific endonuclease subunit slx1 OS=Botryotinia fuckeliana (strain B05.10) GN=slx1 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.064e-16 Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKK--RRPWEMVLCIYGFPTNVSALQFE-WAWQHPMESLAV----RQAAATFKSFSG--------VANKIKLAFTMLNLPNWESFNIKVNYFS 509 F+ CYLL S Y+G T NP RR+RQHNG ++ GAVRT + RPWEM + GFPT+++ALQF+ WAWQ+P +L + R + AT K SG + + + +L +P++ + +++ +F+ Sbjct: 15 FYGCYLLRSTIRH--SALYVGSTPNPVRRLRQHNGLVKGGAVRTSRGNLRPWEMACIVTGFPTSIAALQFDRWAWQNPHITLHIPPSSRISHATQKKRSGHPKRPRHTLQSLLSNLHILLTVPSFSRWPLEIKFFA 148
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_MALGO (Structure-specific endonuclease subunit SLX1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=SLX1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.371e-16 Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 150 FACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVR----------QAAATFKSFSGVANKIKLAFTMLNLPN 473 + CY L SL TYIG T +P RR+RQHNG ++ GA T+ RPW M + +YGFP+ ++ALQFEW+WQ P S +R +++AT ++G ++K T + P+ Sbjct: 15 YVCYCLRSLSR--PNQTYIGSTPDPIRRLRQHNGLVKQGAFYTRMARPWTMDVVVYGFPSKLAALQFEWSWQKPHASRHLRVMHDDGTRPNKSSATAAVYAGRSSKPLFPATRSSAPS 130
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_GIALA (Structure-specific endonuclease subunit SLX1 homolog OS=Giardia lamblia GN=GL50803_16475 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.371e-16 Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 3 Query: 144 GFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQAAAT 407 G FACY L + YIGFT NP RRIRQHN +I GA +T + PW MVL + GF T VSAL+FE+ W +P S V +AT Sbjct: 9 GLFACYCLVAESSESPKRCYIGFTNNPLRRIRQHNRKIAGGARKTSRYGPWRMVLFVGGFSTKVSALKFEYIWTYPTRSRYVNCISAT 96
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_MONBE (Structure-specific endonuclease subunit SLX1 homolog OS=Monosiga brevicollis GN=8836 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 204 IGFTVNPRRRIRQHNGEIRCGAVRTKKRR-PWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRQA 398 IGFT +P RR+RQHN EI GAVRT + + W+M +YGFP V+AL+FEWAWQHP++S +R A Sbjct: 43 IGFTTDPVRRLRQHNSEIGGGAVRTTRAKGSWDMAAIVYGFPNKVAALRFEWAWQHPLKSRRLRDA 108
BLAST of CX046786 vs. ExPASy Swiss-Prot
Match: SLX1_ASPFU (Structure-specific endonuclease subunit slx1 OS=Aspergillus fumigatus GN=slx1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16 Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 147 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRCGAVRT--KKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVR 392 F+ CYLL S YIG T NP RR+ QHNG ++ GA RT +K RPWEMVL + GF + ++ALQFEWAWQ+P S +R Sbjct: 15 FYCCYLLRSTVRH--ASLYIGSTPNPARRLIQHNGVVKGGARRTAAEKLRPWEMVLVVEGFMSRLAALQFEWAWQNPWYSRHLR 96 The following BLAST results are available for this feature:
BLAST of CX046786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046786 ID=CX046786; Name=CX046786; organism=Citrus sinensis; type=EST; length=844bpback to top |