CX046781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_AZOSB (30S ribosomal protein S12 OS=Azoarcus sp. (strain BH72) GN=rpsL PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.016e-36 Identity = 70/100 (70.00%), Postives = 86/100 (86.00%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPK 302 L+ CPQK+GVC RV T TPKKPNSALRK+AKVRL+N ++ +YI GEGHNLQEHS+VLIRGGRVKDLPGV++H +RG DL G+ DR++ RSKYGA++PK Sbjct: 24 LEACPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQSRSKYGAKRPK 123
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_SYNFM (30S ribosomal protein S12 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 71/100 (71.00%), Postives = 86/100 (86.00%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPK 302 L CPQK+GVC+RV T TPKKPNSALRKIA+VRL+N ++ +YIPG GHNLQEHS+VLIRGGRVKDLPGV++H IRG D LG+ DR++GRSKYG ++PK Sbjct: 24 LQCCPQKRGVCVRVYTTTPKKPNSALRKIARVRLTNGIEVTSYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGTLDALGVADRKQGRSKYGTKRPK 123
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_RALSO (30S ribosomal protein S12 OS=Ralstonia solanacearum GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 69/101 (68.32%), Postives = 87/101 (86.14%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPKS 305 L+ CPQ++GVC RV T TPKKPNSALRK+AKVRL+N ++ +YI GEGHNLQEHS+VLIRGGRVKDLPGV++H +RG DL G+ DR++ RSKYGA++PK+ Sbjct: 24 LENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKA 124
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_RALPJ (30S ribosomal protein S12 OS=Ralstonia pickettii (strain 12J) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 69/101 (68.32%), Postives = 87/101 (86.14%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPKS 305 L+ CPQ++GVC RV T TPKKPNSALRK+AKVRL+N ++ +YI GEGHNLQEHS+VLIRGGRVKDLPGV++H +RG DL G+ DR++ RSKYGA++PK+ Sbjct: 24 LENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKA 124
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_RALEJ (30S ribosomal protein S12 OS=Ralstonia eutropha (strain JMP134) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 69/101 (68.32%), Postives = 87/101 (86.14%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPKS 305 L+ CPQ++GVC RV T TPKKPNSALRK+AKVRL+N ++ +YI GEGHNLQEHS+VLIRGGRVKDLPGV++H +RG DL G+ DR++ RSKYGA++PK+ Sbjct: 24 LENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKA 124
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_RALEH (30S ribosomal protein S12 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 69/101 (68.32%), Postives = 87/101 (86.14%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPKS 305 L+ CPQ++GVC RV T TPKKPNSALRK+AKVRL+N ++ +YI GEGHNLQEHS+VLIRGGRVKDLPGV++H +RG DL G+ DR++ RSKYGA++PK+ Sbjct: 24 LENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKA 124
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_PARDP (30S ribosomal protein S12 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 70/100 (70.00%), Postives = 85/100 (85.00%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPK 302 L CPQK+GVC RV T TPKKPNSA+RK+AKVRL+N ++ +YIPGE HNLQEHS+VLIRGGRVKDLPGV++H +RGV D G+ DRR+ RSKYGA++PK Sbjct: 24 LQSCPQKRGVCTRVYTTTPKKPNSAMRKVAKVRLTNGFEVISYIPGEKHNLQEHSVVLIRGGRVKDLPGVRYHILRGVLDTQGVKDRRQRRSKYGAKRPK 123
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_NOVAD (30S ribosomal protein S12 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 68/100 (68.00%), Postives = 87/100 (87.00%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPK 302 ++Q PQK+GVC RV T TPKKPNSALRK+AK+RL+N ++ +YIPGEGHNLQEHS+VLIRGGRV+DLPGV++H +RGV D G+ DR++ RSKYGA++PK Sbjct: 24 MEQNPQKRGVCTRVYTTTPKKPNSALRKVAKIRLTNSREVISYIPGEGHNLQEHSVVLIRGGRVRDLPGVRYHVLRGVLDTQGVKDRKQSRSKYGAKRPK 123
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_METNO (30S ribosomal protein S12 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 69/100 (69.00%), Postives = 86/100 (86.00%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPK 302 L+ CPQK+GVC RV T TPKKPNSALRK+AKVRL+N ++ YIPGEGHNLQEHS+V+IRGGRVKDLPGV++H +RGV D G+ +R++ RSKYGA++PK Sbjct: 24 LEACPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHILRGVLDTQGVKNRKQRRSKYGAKRPK 123
BLAST of CX046781 vs. ExPASy Swiss-Prot
Match: RS12_METFK (30S ribosomal protein S12 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rpsL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.327e-36 Identity = 68/101 (67.33%), Postives = 87/101 (86.14%), Query Frame = 3 Query: 3 LDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKPKS 305 L+ CPQK+GVC RV T TPKKPNSALRK+AKVRL+N +++ +YI GEGHNLQEHS+VL+RGGRVKDLPGV++H +RG D G+ DR++ RSKYGA++PK+ Sbjct: 24 LESCPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGYEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGSLDTAGVKDRKQARSKYGAKRPKA 124 The following BLAST results are available for this feature:
BLAST of CX046781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046781 ID=CX046781; Name=CX046781; organism=Citrus sinensis; type=EST; length=891bpback to top |