CX046771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_SCHPO (Mediator of RNA polymerase II transcription subunit 31 OS=Schizosaccharomyces pombe GN=med31 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.208e-24 Identity = 49/97 (50.52%), Postives = 73/97 (75.26%), Query Frame = -1 Query: 479 KDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFW 769 K PDD + RF +ELEFVQ L+NP Y+++LAQ++YFEDEAF+ YL+Y++YW+ PEY+KFI+YP CL+ L LL+N FRN ++ + + + ++ W Sbjct: 9 KVPDD-KSRFEIELEFVQMLSNPWYLNFLAQHKYFEDEAFLQYLEYMEYWREPEYVKFIIYPTCLHMLTLLKNPQFRNDISRADLSKQVNDEIYYEW 104
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_AEDAE (Mediator of RNA polymerase II transcription subunit 31 OS=Aedes aegypti GN=MED31 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22 Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = -1 Query: 452 DDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRLK 760 D + RF ELEFVQCLANP Y+H+LAQ +F+D FI YLKYL +W+ PE K++ YP CLYFL+LLQ +FR + + + Q W++Y R + Sbjct: 17 DAQKLRFQAELEFVQCLANPNYLHFLAQRGFFKDSNFINYLKYLLHWKDPEMAKYLKYPMCLYFLDLLQYEHFRREIVNAQCCKFIDDQAILLWQHYTRRRTR 119
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_TAESO (Mediator of RNA polymerase II transcription subunit 31 OS=Taenia solium GN=Ts24233 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21 Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 446 DDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRLKHI 760 +D RF +ELEFVQ L NP Y+ +LAQ F+ FI YL YLQYW+ P Y +FI YP CL+ L+LLQ+ +FR +AH + Q WKNY R + + Sbjct: 25 EDPWVRFQIELEFVQSLGNPDYLTFLAQQGCFDKPEFINYLSYLQYWKSPSYSRFITYPFCLHMLDLLQSPDFRREVAHESVTRFIDDQMLLHWKNYLRKRAEMV 129
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_CAEBR (Mediator of RNA polymerase II transcription subunit 31 OS=Caenorhabditis briggsae GN=mdt-31 PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.496e-21 Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 458 PDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNR 763 P+ + RF +E EFVQ LANP Y+++LAQ YF++E F+ YLKYL YW+ P+Y + + +P CL+ LE LQ+ FR+AMA+ + + Q W+ Y R Sbjct: 4 PESEKTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKNPQYARCLKFPQCLHMLEALQSQQFRDAMAYGPSAKFVEDQVVLQWQFYLRKR 105
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_CANAL (Mediator of RNA polymerase II transcription subunit 31 OS=Candida albicans GN=SOH1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.700e-21 Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = -1 Query: 539 RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFR 745 R+ +ELEFVQ L+N Y++YLAQN YF DE FI YL YLQYW +PEY KF++YP+CL+ L+LLQ+ NFR Sbjct: 30 RWEIELEFVQSLSNIPYVNYLAQNNYFNDENFINYLNYLQYWTQPEYSKFLVYPNCLHILKLLQDENFR 98
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_CAEEL (Mediator of RNA polymerase II transcription subunit 31 OS=Caenorhabditis elegans GN=mdt-31 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.686e-20 Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = -1 Query: 458 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNR 751 + RF +E EFVQ LANP Y+++LAQ YF++E F+ YLKYL YW+ P+Y + + +P CL+ LE LQ+ FR++MA+ + + Q W+ Y R Sbjct: 8 KTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKDPQYARCLKFPQCLHMLEALQSQQFRDSMAYGPSAKFVEDQVVLQWQFYLRKR 105
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_YARLI (Mediator of RNA polymerase II transcription subunit 31 OS=Yarrowia lipolytica GN=SOH1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20 Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = -1 Query: 479 DGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFW 757 D RF ELEFVQ LANP Y+ YLA N+Y E F+ YL YL+YW+ P+Y +F++YP+CL+ L+LLQ A FR ++ P + + ++ W Sbjct: 23 DRSLRFEAELEFVQSLANPQYLSYLAHNKYLESPEFLNYLSYLEYWREPKYARFLVYPNCLHVLKLLQYATFRKEISRPDFAKQLMDEFYYAW 115
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_DEBHA (Mediator of RNA polymerase II transcription subunit 31 OS=Debaryomyces hansenii GN=SOH1 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.236e-17 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = -1 Query: 521 QRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHP 748 +R+ +ELEFVQ LAN Y+++LAQN Y + F+ Y++YL YW+ PEY K+++YP+CL+ L LLQN FR + P Sbjct: 7 KRWEIELEFVQSLANIQYLNHLAQNNYLSNPEFLNYIEYLNYWKEPEYSKYLVYPNCLHILTLLQNEEFRKNILIP 82
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_CRYNE (Mediator of RNA polymerase II transcription subunit 31 OS=Cryptococcus neoformans GN=SOH1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.982e-17 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = -1 Query: 530 RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAM 745 RF ELEF+QCLA+P Y+H L Y AF+ YLKYL+YW+ P+Y++FI+YP CL +L LLQ FR+ + Sbjct: 32 RFQSELEFIQCLAHPQYLHELHIQGYLGKPAFLNYLKYLEYWREPQYVRFIIYPTCLVYLTLLQTELFRSRL 103
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_ENCCU (Mediator of RNA polymerase II transcription subunit 31 OS=Encephalitozoon cuniculi GN=SOH1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.110e-16 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = -1 Query: 473 RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELA-HRQQFFFWKN 745 RF ELEFVQ L NP Y+ +L + +FE E F YL+YL+YW+ PEY +F+ YP CL LE L + N N M N LA QQ+F W N Sbjct: 5 RFERELEFVQLLCNPDYLRWLTREGHFESEEFRSYLRYLEYWRSPEYSRFLTYPQCLAVLEHLNSENI-NDMLSDENFFLALGEQQYFIWLN 95 The following BLAST results are available for this feature:
BLAST of CX046771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046771 ID=CX046771; Name=CX046771; organism=Citrus sinensis; type=EST; length=862bpback to top |