CX046771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_PHANO (Mediator of RNA polymerase II transcription subunit 31 OS=Phaeosphaeria nodorum GN=SOH1 PE=3 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.449e-16 Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = -1 Query: 512 GRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYP-HCLYFLELLQNANFRNAMAHP--ANK 754 G RF LELEFVQCLANP Y++YLA +YF+ F+ YL YLQY+ P+YIKF+ +P L LELLQ FR + P ANK Sbjct: 17 GFTRFELELEFVQCLANPVYLNYLATQKYFDKPEFVAYLDYLQYFAEPKYIKFLHHPGPTLRALELLQQERFRQDIITPGLANK 100
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_NEUCR (Mediator of RNA polymerase II transcription subunit 31 OS=Neurospora crassa GN=soh-1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16 Identity = 46/97 (47.42%), Postives = 57/97 (58.76%), Query Frame = -1 Query: 521 ASDAPSSPKKVYKDPD-DGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYP-HCLYFLELLQNANFRNAMAHP 805 A + P+ P +P G RF LELEFVQ L NP Y+++LA + + AFI YL YLQYW RP Y+K+I YP L LELLQ FR + P Sbjct: 12 AREPPAPPGSGADEPKYGGYTRFELELEFVQALGNPLYLNHLASRKLLSNPAFIAYLDYLQYWSRPPYLKYITYPGPTLKNLELLQQEKFRQDIISP 108
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_USTMA (Mediator of RNA polymerase II transcription subunit 31 OS=Ustilago maydis GN=SOH1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.342e-13 Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = -1 Query: 464 SSPKKVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQN-ANFRNAMAHPANKELAHRQQFFFWKNYRN 790 +SP + + + F +LEF+ LANP Y+++LA + +F YLKYL Y++ P+Y+K++ YP L+FL+LLQN FR A PA +Q W +R+ Sbjct: 17 ASPSRDEQRRQANQAAFSRDLEFLSSLANPYYLNHLALSGALSSPSFKRYLKYLDYFRHPKYVKYLHYPQALHFLDLLQNEEEFRLACRDPAFAGEVMAKQIGHWATWRD 126
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_ASHGO (Mediator of RNA polymerase II transcription subunit 31 OS=Ashbya gossypii GN=SOH1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.270e-12 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = -1 Query: 551 SPKKVYKDPDDGRQ---RFLLELEFVQCLANPTYIHYL-AQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQN 787 S + ++ +G Q RF +ELEFVQ LAN Y+ +L Q++ ++D F YLKYL+YW P Y +FI+YP+CL+ L+LL + Sbjct: 5 SSEPPFEPSSEGEQLPSRFEVELEFVQSLANIPYVTFLLTQHQIWQDPRFKAYLKYLEYWCEPPYTQFIVYPNCLFVLKLLNS 87
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_YEAST (Mediator of RNA polymerase II transcription subunit 31 OS=Saccharomyces cerevisiae GN=SOH1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = -1 Query: 557 DAPSSPKKVYKDPDDGRQRFLLELEFVQCLANPTYIHYL-AQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELL 799 +AP++P D + RF +ELEF+Q LAN Y+ YL Q + ++ F YLKYL+YW P Y + I+YP+CL+ L+LL Sbjct: 7 NAPATPSS---DQNPLPTRFEVELEFIQSLANIQYVTYLLTQQQIWKSPNFKNYLKYLEYWCNPPYSQCIVYPNCLFILKLL 85
BLAST of CX046771 vs. ExPASy Swiss-Prot
Match: MED31_KLULA (Mediator of RNA polymerase II transcription subunit 31 OS=Kluyveromyces lactis GN=SOH1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = -1 Query: 557 RFLLELEFVQCLANPTYIHYL-AQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELL 745 RF +ELEFVQ LAN Y+ YL Q + ++D F YLKYL+YW PEY + I+YP+ L+ L+LL Sbjct: 19 RFEIELEFVQSLANIPYVTYLLTQLQLWQDPKFKRYLKYLEYWHEPEYAQCIVYPNSLFVLKLL 82 The following BLAST results are available for this feature:
BLAST of CX046771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046771 ID=CX046771; Name=CX046771; organism=Citrus sinensis; type=EST; length=862bpback to top |