CX046768

Overview
NameCX046768
Unique NameCX046768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2433 contig Csv1_Contig2433:10..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: SOL3_YEAST (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae GN=SOL3 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 80/242 (33.06%), Postives = 125/242 (51.65%), Query Frame = 3
Query:  129 LSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGK--LCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------GDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNG-KLVWF 815
            L+  L ++I    + +++++  F +++SGGSLI  + +  + +   +  V W+KW I+++DER+V    ADSNY   K  +L K+P     +V+ +++SL   +A        EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H  I DL  +   LP  +V    G K  WF
Sbjct:   13 LTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMH-EIFDLKND--QLPTALVNKLFGEKTSWF 235          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS7 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 80/242 (33.06%), Postives = 125/242 (51.65%), Query Frame = 3
Query:  129 LSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGK--LCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------GDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNG-KLVWF 815
            L+  L ++I    + +++++  F +++SGGSLI  + +  + +   +  V W+KW I+++DER+V    ADSNY   K  +L K+P     +V+ +++SL   +A        EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H  I DL  +   LP  +V    G K  WF
Sbjct:   13 LTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMH-EIFDLKND--QLPTALVNKLFGEKTSWF 235          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS6 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 80/242 (33.06%), Postives = 125/242 (51.65%), Query Frame = 3
Query:  129 LSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGK--LCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------GDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNG-KLVWF 815
            L+  L ++I    + +++++  F +++SGGSLI  + +  + +   +  V W+KW I+++DER+V    ADSNY   K  +L K+P     +V+ +++SL   +A        EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H  I DL  +   LP  +V    G K  WF
Sbjct:   13 LTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMH-EIFDLKND--QLPTALVNKLFGEKTSWF 235          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS1 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 80/242 (33.06%), Postives = 125/242 (51.65%), Query Frame = 3
Query:  129 LSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGK--LCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPS-HVHSINDSLSAEEA------GDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS---VLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNG-KLVWF 815
            L+  L ++I    + +++++  F +++SGGSLI  + +  + +   +  V W+KW I+++DER+V    ADSNY   K  +L K+P     +V+ +++SL   +A        EYE  + Q++                DL+LLG G DGH  SLFP  +   +L+   + V++  DSPKPP +RITFTLPV+  A        G SK   +H  I DL  +   LP  +V    G K  WF
Sbjct:   13 LTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESNNKIAAEYERIVPQVL----------------DLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMH-EIFDLKND--QLPTALVNKLFGEKTSWF 235          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: 6PGL_SYNY3 (6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.951e-24
Identity = 75/215 (34.88%), Postives = 111/215 (51.63%), Query Frame = 3
Query:  174 SVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSI-NDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAV-HLAIDDLGPNCPSLPARMVQPTNGKLVW 812
            ++ ERG   IALSGG+       L EA   + + W K ++FW DER V+ +H DSN ++A+   L +V I  +++H +   +   E+    YE ++    +       +    P FDLILLG+G DGH ASLFP+   L V ++    IT   K    R+TFT+P+IN A        G SK  A+  +   +  P     PAR +QP  G+L+W
Sbjct:   29 AIAERGQGTIALSGGNT---PKPLYEALARQALPWEKIHVFWGDERYVSVDHPDSNQRMARLAWLDQVDIPEANIHPMPTAAADPEQDAQTYENELATFFQV------EAGHFPAFDLILLGLGDDGHTASLFPHTPALTVGDR---LITVGNKDGQPRLTFTIPLINRARSVVFLVAGASKQHALGEIFAPEADPQ--QYPARFIQP-QGELIW 228          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: 6PGL_ANASP (6-phosphogluconolactonase OS=Anabaena sp. (strain PCC 7120) GN=pgl PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.575e-24
Identity = 80/231 (34.63%), Postives = 119/231 (51.52%), Query Frame = 3
Query:  147 DYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSI-----NDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESK----AEAVHLAIDDLGPNCPSLPARMVQPTNGKLVW 812
            D I    + ++K++G F IALSGGS       L EA   + + W K ++FW DER V+ +H DSN  +A+   L +V I   ++H++     N ++SA     +YE  ++          S   + P  D++LLGMG D H ASLFP+   L V+++    IT   K    RITFT P IN+AS       G +K    A+    + DDL     + P+R +QP  G+L+W
Sbjct:   20 DLILTKLDTAIKQQGRFTIALSGGST---PKPLYEAIAAQKLPWDKIHVFWGDERYVSPDHPDSNELMARTAWLDRVDIPAENIHAVPTLDNNPAVSAA----KYEQHLQTFFN------SAPGEFPALDVVLLGMGDDAHTASLFPHTEALQVRDR---LITVGNKDGNPRITFTYPFINAASSVIFVVAGANKRPALAQVFAPSADDL-----AYPSRFIQP-QGELLW 228          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCLE (6-phosphogluconolactonase OS=Mycobacterium leprae GN=pgl PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.263e-23
Identity = 73/209 (34.93%), Postives = 109/209 (52.15%), Query Frame = 3
Query:  153 IADLSEASVKERGVFAIALSGGSL-IGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPA 776
            +A   +++V  R    I L+GGS  IGL+  L  A   + +DW++ ++FW DER V K+  + N K A+  LL  + I PS VH +       E G++ E       +      +     P FD+ L+GMG +GH+ SLFPN   +   ++ V  + +SPKPPPERIT TL  I  +       +G +KA+AV  A+   G    S+PA
Sbjct:   22 LASTIQSAVAARERALIVLTGGSSGIGLLRDL--ATRGQQIDWSRVHLFWGDERYVPKDDDERNEKQARVALLDHIDIPPSQVHPM--PAGDGEFGNDLEAAALAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMG--GAPSASIPA 224          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 3
Query:  171 ASVKERGVFAIALSGGSL-IGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDI--SDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPA 776
            A+V  RG   I L+GG   I L+  L  +   + ++W+K ++FW DER V ++  + N K A+  LL+ V I  + VH     ++A +     + D   L   +++  S       P FD+ LLGMG +GH+ SLFP+   +    + V  + DSPKPPP RIT TLP I  +       +G  KA+AV  AI    P   S+PA
Sbjct:   28 AAVAARGQALIVLTGGGNGIALLRYL--SAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHP----MAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADP--VSVPA 224          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 3
Query:  171 ASVKERGVFAIALSGGSL-IGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDI--SDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPA 776
            A+V  RG   I L+GG   I L+  L  +   + ++W+K ++FW DER V ++  + N K A+  LL+ V I  + VH     ++A +     + D   L   +++  S       P FD+ LLGMG +GH+ SLFP+   +    + V  + DSPKPPP RIT TLP I  +       +G  KA+AV  AI    P   S+PA
Sbjct:   28 AAVAARGQALIVLTGGGNGIALLRYL--SAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHP----MAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADP--VSVPA 224          
BLAST of CX046768 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 79/238 (33.19%), Postives = 116/238 (48.74%), Query Frame = 3
Query:  123 EELSTNLADYIADLSEASVKERGVFAIALSGGSL-IGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHS----INDSLSAEE--AGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXXTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWF 815
            EEL + LA  I   +  +V+  G F +ALSGGS  I L  +L    Y+    WA  +++  DER V  +  DSN++  +  LL  V +   ++H     ++  L AEE      Y  +I  LV               FDL+LLGMG+DGH ASLFP  S   +    +  +T+SP  P +R++ +LP+IN A        G +K E   L +  +G      P   V P +G+LVW+
Sbjct:  559 EELISKLASDIEAAAVQAVRHFGKFHLALSGGSSPIALFQQLATGHYS--FPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANS-----------SFDLVLLGMGTDGHTASLFP-QSPTGLDGDQLVVLTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTL-VSRVGHEPKKWPISGVVPLSGQLVWY 781          
The following BLAST results are available for this feature:
BLAST of CX046768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
SOL3_YEAST1.565e-2533.066-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS71.565e-2533.066-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS61.565e-2533.066-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS11.565e-2533.066-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
6PGL_SYNY32.951e-2434.886-phosphogluconolactonase OS=Synechocystis sp. (st... [more]
6PGL_ANASP6.575e-2434.636-phosphogluconolactonase OS=Anabaena sp. (strain ... [more]
6PGL_MYCLE3.263e-2334.936-phosphogluconolactonase OS=Mycobacterium leprae ... [more]
6PGL_MYCTU9.495e-2335.126-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO9.495e-2335.126-phosphogluconolactonase OS=Mycobacterium bovis G... [more]
G6PE_MOUSE1.161e-2033.19GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A12-B23-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046768 ID=CX046768; Name=CX046768; organism=Citrus sinensis; type=EST; length=816bp
TTCTCTTTGCCACCTATCATCTTCTTTCCTTTTCTTTTTTTTTTAGTTGA
TAGCTTGTTGAAAGCATGGCTTTTTCTGGGGTTCATAGAGATAGAGGGGA
GTTGAGGATTCATGAGAGTGTGGAGGAGCTTAGCACCAATTTGGCAGACT
ATATTGCTGATTTGTCAGAGGCATCAGTGAAAGAGCGTGGTGTCTTTGCC
ATTGCCTTATCTGGTGGTTCCCTCATTGGCTTAATGGGGAAACTCTGTGA
AGCTCCTTATAACAAGACTGTTGACTGGGCTAAATGGTATATATTCTGGG
CAGACGAACGCGTAGTGGCAAAAAATCATGCTGATAGCAATTATAAGCTT
GCAAAGGAAGGCCTTTTGTCCAAGGTTCCGATAGTTCCCAGTCACGTACA
TTCCATTAATGATTCATTGTCAGCAGAGGAGGCTGGTGATGAGTATGAGT
TTGACATCCGACAGCTGGTGAAAGCCCGGATGGTCTGTGTCTCTGATATT
AGTGACTGCCCCAAATTTGACCTCATTCTTCTTGGAATGGGCTCTGATGG
CCATGTTGCCTCACTGTTCCCTAACCATTCGGTGCTTGATGTGAAAAATC
AGTGGGTAAGCTTTATCACTGATTCGCCTAAACCCCCACCAGAGAGGATC
ACATTCACTTTGCCTGTCATCAACTCAGCATCCATTGTAGTTGTGGTCGT
GACAGGTGAGAGCAAGGCAGAGGCTGTGCACTTGGCGATTGATGACCTTG
GACCTAATTGCCCATCACTGCCAGCACGAATGGTCCAGCCAACAAATGGG
AAGTTGGTATGGTTTT
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