CX046767

Overview
NameCX046767
Unique NameCX046767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2433 contig Csv1_Contig2433:277..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: SOL1_YEAST (6-phosphogluconolactonase-like protein 1 OS=Saccharomyces cerevisiae GN=SOL1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.732e-17
Identity = 65/193 (33.68%), Postives = 96/193 (49.74%), Query Frame = -1
Query:  305 VDWAKWYIFWADERVVAKNHADSNYKLAKE---GLLSKVPIVPSHVHSINDSL--SAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPN-HSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPA 865
            V W KW I++ADER+V  + ++SNY LAK     L+         ++ I++SL    +E  D YE   + L+K       D    P FDL LLG   DGH+ASLFPN    L     WV  + ++P  P  RI+ T+PVI  +      V G +KA  +   ++      PS  + + +   G++ WF+D  A
Sbjct:  115 VQWGKWDIYFADERLVPFSSSESNYGLAKRKIFDLIDTEKYGTPKIYHIDESLINDPQECADNYE---KILIKG--FAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQENLRENLAWVIPVENAPSGPSNRISLTIPVICHSHRVTFVVEGATKAPVIKTIMERPEKGLPS--SIVNEGAAGRVSWFVDDDA 300          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_AGGAC (6-phosphogluconolactonase OS=Aggregatibacter actinomycetemcomitans GN=pgl PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17
Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = -1
Query:  293 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKL 865
            ++W   + +W D+R+V+ +  +SNY   ++ L   + I   ++H I          +E  F++++        +SD      FD I+LGMG+DGH +SLFP+ +  D +N  ++ I   P+    RI+ T  +I  A      VTGE KAE +         N P  PA  +   NG   W+LDK AA  L
Sbjct:   56 INWRNLHFWWGDDRMVSPSDPESNYGEVQKLLFDHIQIPAENIHRIRGE-------NEPHFELKRFQAELSAVISD----GVFDWIILGMGADGHTSSLFPHQTNFDDEN--LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGEGKAEILKEIQSTPAENLP-YPAAKIYAKNGVTEWYLDKDAAKLL 232          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: SOL2_YEAST (6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae GN=SOL2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.583e-17
Identity = 65/193 (33.68%), Postives = 93/193 (48.19%), Query Frame = -1
Query:  305 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVP---SHVHSINDSL--SAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPN-HSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPA 865
            V W  W I++ADER+V  +  +SNY  AK  +L  +         V+ I++SL    +E  D YE      V  R     D    P FDL LLG   DGH+ASLFPN    L  K  WV  + ++P  P  RI+ T+PVI  +      V G +KA  +   ++      PS  + + +   G++ WF+D  A
Sbjct:  111 VRWGDWDIYFADERLVPFSSNESNYGCAKRKILDLIDTAKYGTPKVYHIDESLIDDPQECADNYE-----KVLIRGFAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQDNLREKLAWVVPVENAPSGPSTRISLTIPVICHSHRVTFVVEGATKAPIIKTIMERPEKGLPS--SIVNEGAAGRVSWFVDDDA 296          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.915e-16
Identity = 63/191 (32.98%), Postives = 94/191 (49.21%), Query Frame = -1
Query:  305 WAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHS----INDSLSAEE--AGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPA 859
            WA  +++  DER V  +  DSN++  +  LL  V +   ++H     ++  L AEE      Y  +I  LV               FDL+LLGMG+DGH ASLFP  S   +    +  +T+SP  P +R++ +LP+IN A      V G +K E   L +  +G      P   V P +G+LVW++D  A
Sbjct:  609 WAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANS-----------SFDLVLLGMGTDGHTASLFP-QSPTGLDGDQLVVLTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTL-VSRVGHEPKKWPISGVVPLSGQLVWYMDYEA 786          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 61/185 (32.97%), Postives = 92/185 (49.73%), Query Frame = -1
Query:  305 WAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPA 859
            WA  +++  DER V  +  +SN++  +  LL  V I   ++H +   L      +E   D    + AR +  S +     FDL+LLGMG+DGH ASLFP  S   +  + +  +T SP  P  R++ +LP+IN A      V G  K E   L +  +G      P   V P +G+LVW++D  A
Sbjct:  611 WAHTHLWLVDERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEE---DQGAQIYAREI--SALVANSSFDLVLLGMGADGHTASLFP-QSPTGLDGEQLVVLTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKREITTL-VSRVGHEPKKWPISGVLPHSGQLVWYMDYDA 788          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_HAEIN (6-phosphogluconolactonase OS=Haemophilus influenzae GN=pgl PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 58/191 (30.37%), Postives = 93/191 (48.69%), Query Frame = -1
Query:  293 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKL 865
            ++W   + +W D+R+V  +  +SNY   ++ L   + I   ++H I          +E  F++++  +     +S +     FD I+LGMG DGH ASLFP+ +  D +N  ++ I   P+    RI+ T  +I  A      VTGESKA+ +         N P  PA  ++  NG   W+LDK A   L
Sbjct:   56 INWKNLHFWWGDDRMVPPSDPESNYGEVQKLLFDHIQIPAENIHRIRGE-------NEPHFELKRFEEE----LSAVIPNGVFDWIILGMGIDGHTASLFPHQTNFDDEN--LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGESKADILKEIQTTPAENLP-YPAAKIKAKNGVTEWYLDKAAVRLL 232          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.621e-15
Identity = 66/202 (32.67%), Postives = 100/202 (49.50%), Query Frame = -1
Query:  299 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLL-------SKVPIVPSHVHSINDSL--SAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPN---HSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNG-KLVWFLDKPAAS 865
            + W +W IF+ DER+V      SNY   K+ +L       +++ + P+ V++IN+SL    E A  +   +   ++ A             FDLILLG G DGH  SLFP    + +++  ++ V +  +SPK P +RITFTL V+  A      V G +K   +H   D L      LP+ +V    G K+ WFLD  A +
Sbjct:   64 IKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPLVHQGNQLNLGPT-VYTINESLIGGGETANRKIAEEYASMLPA------------SFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAKKAIMH---DVLIVKNSELPSVLVNEMVGTKVTWFLDDEAGA 249          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 58/183 (31.69%), Postives = 88/183 (48.09%), Query Frame = -1
Query:  311 WAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDK 859
            W + + F +DER V  +   SN++   E L S+  I   +VH ++ SL  E+A ++YE +IR             S   +FDL +LGMG DGHVAS+F   +    K+  V+F   S  P   R+T T   +N++      + G+ K   +   + D       LPA  V+    K VWF+ K
Sbjct:   59 WNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIR-------------SATDQFDLAILGMGPDGHVASIFDLET--GNKDNLVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKD-----TPLPAYFVRGKE-KTVWFVGK 220          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_TREPA (6-phosphogluconolactonase OS=Treponema pallidum GN=pgl PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 56/175 (32.00%), Postives = 82/175 (46.86%), Query Frame = -1
Query:  356 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIR-QLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCP----SLPAR 865
            +DW +   FW+DER V    A SN+ +    LL  + I P  V  +    + E A   Y  +I  +L + R V        P FD+ILLGMG+DGH AS+FP H +    +     +   P    +R++FT  +IN+A      VTG  K + +     D   + P    +LP R
Sbjct:   55 LDWKRLRFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIEARLPRQRGV--------PCFDIILLGMGADGHTASIFP-HEIELWDHSGCCVVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREKQDMLASVASDPHASVPLHAWTLPKR 220          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLMU (6-phosphogluconolactonase OS=Chlamydia muridarum GN=pgl PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 61/203 (30.05%), Postives = 93/203 (45.81%), Query Frame = -1
Query:  290 DWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDE-YEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFL-----------DKPAASKLE 862
            D +K ++FW DER      A SNY  A + +L  + I  + +  ++   +A   GDE YE  IR+ V   +           FD+++LG+G DGH  SLFP  + L+ K++ V F  + P+    R+T T P++  A      + G +K +  H  +  LG +  + P   V      L W L           D PA  KLE
Sbjct:   70 DCSKIFVFWGDERASEDTEAGSNYLKAMD-ILKWLRIPDTQIFRMD---TANPKGDEIYENLIREHVPDTI-----------FDMVMLGVGEDGHTLSLFPGTAALEEKDRLVVF-NEVPQLQTRRMTLTFPIVRQARHLVAYIQGTAKQDLCHKLLHPLGRD--TFPIERVGTPLNPLQWVLSSDCCRAADLADIPAECKLE 254          
The following BLAST results are available for this feature:
BLAST of CX046767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
SOL1_YEAST1.732e-1733.686-phosphogluconolactonase-like protein 1 OS=Saccha... [more]
6PGL_AGGAC2.955e-1730.896-phosphogluconolactonase OS=Aggregatibacter actin... [more]
SOL2_YEAST6.583e-1733.686-phosphogluconolactonase-like protein 2 OS=Saccha... [more]
G6PE_MOUSE1.915e-1632.98GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PE_HUMAN7.278e-1632.97GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
6PGL_HAEIN7.278e-1630.376-phosphogluconolactonase OS=Haemophilus influenza... [more]
SOL4_YEAST1.621e-1532.676-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
6PGL_THEMA1.793e-1431.696-phosphogluconolactonase OS=Thermotoga maritima G... [more]
6PGL_TREPA5.216e-1432.006-phosphogluconolactonase OS=Treponema pallidum GN... [more]
6PGL_CHLMU5.767e-1330.056-phosphogluconolactonase OS=Chlamydia muridarum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A12-B23-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046767 ID=CX046767; Name=CX046767; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTGGGCGAAAAAAGAAAAAGGCTTTCTCATTGAGGCTCCAACATT
ATTTACCTCATCTTACAAAAAGATCACCACACTTCTCAACCCCACTAGAA
AAGAGAGGATTAAAAAGAGAATATAGGGGGAAAAAAGGCCAAAATGGAGA
ATTCAACCCAAAGCAACATAAAAGAAGCGGCGCCTAACGGAAGAAGCTAA
AAGGATCAATAGTTCTCAAACCCCTCCACTACATACAAACATACACTTGG
GCAAGAATTGCTTTGACCCTACTCACAAAATTGAACACTTTCGAGCTTTG
AGGCAGCCGGCTTGTCCAAAAACCATACCAACTTCCCATTTGTTGGCTGG
ACCATTCGTGCTGGCAGTGATGGGCAATTAGGTCCAAGGTCATCAATCGC
CAAGTGCACAGCCTCTGCCTTGCTCTCACCTGTCACGACCACAACTACAA
TGGATGCTGAGTTGATGACAGGCAAAGTGAATGTGATCCTCTCTGGTGGG
GGTTTAGGCGAATCAGTGATAAAGCTTACCCACTGATTTTTCACATCAAG
CACCGAATGGTTAGGGAACAGTGAGGCAACATGGCCATCAGAGCCCATTC
CAAGAAGAATGAGGTCAAATTTGGGGCAGTCACTAATATCAGAGACACAG
ACCATCCGGGCTTTCACCAGCTGTCGGATGTCAAACTCATACTCATCACC
AGCCTCCTCTGCTGACAATGAATCATTAATGGAATGTACGTGACTGGGAA
CTATCGGAACCTTGGACAAAAGGCCTTCCTTTGCAAGCTTATAATTGCTA
TCAGCATGATTTTTTGCCACTACGCGTTCGTCTGCCCAGAATATATACCA
TTTAGCCCAGTCAACAGT
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