CX046763

Overview
NameCX046763
Unique NameCX046763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046763 vs. ExPASy Swiss-Prot
Match: OLEO2_ORYSI (Oleosin 18 kDa OS=Oryza sativa subsp. indica GN=OLE18 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 3
Query:  138 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKA 407
            GG LLVLSGL +A +V+ L +ATP+ +I SPVLVPA + + L + GFL SG  G+  +S L+++            D +EQAR ++A  A
Sbjct:   46 GGLLLVLSGLALAASVVGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTPDYVEQARRRMAEAA 135          
BLAST of CX046763 vs. ExPASy Swiss-Prot
Match: OLNB1_BRANA (Oleosin-B1 OS=Brassica napus GN=OlnB1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  147 LLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPP 359
            LL++SG+++AGT  A     PL V+ SP+LVPA IT  LL  G  A+GG G  A++++ W+Y+  TG  PP
Sbjct:   31 LLLISGVSLAGTAAAFIATMPLFVVFSPILVPAGITTGLLTTGLAAAGGAGATAVTIILWLYKRATGKEPP 101          
BLAST of CX046763 vs. ExPASy Swiss-Prot
Match: OLEO3_MAIZE (Oleosin Zm-II OS=Zea mays GN=OLE18 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 3
Query:  138 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKARE 413
            GG LLVLSGL +  +V+ L +ATP+ +I SPVLVPA + +   +MGFL SG  G+  +S L+ +            D +E+AR ++A  A +
Sbjct:   59 GGLLLVLSGLALTASVVGLAVATPVFLIFSPVLVPAALLIGTAVMGFLTSGALGLGGLSSLTCLANTARQAFQRTPDYVEEARRRMAEAAAQ 150          
The following BLAST results are available for this feature:
BLAST of CX046763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO2_ORYSI1.097e-1343.33Oleosin 18 kDa OS=Oryza sativa subsp. indica GN=OL... [more]
OLNB1_BRANA7.110e-1346.48Oleosin-B1 OS=Brassica napus GN=OlnB1 PE=1 SV=2[more]
OLEO3_MAIZE9.286e-1340.22Oleosin Zm-II OS=Zea mays GN=OLE18 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A09-B17-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046763 ID=CX046763; Name=CX046763; organism=Citrus sinensis; type=EST; length=717bp
ATCGACAAATAATCACCGTTAGATTTAACATCAATACCGATATGGCTGAA
CATTACCAACCACTCCAGCAGACACAGCTGCAGAGCCGTCAGCCCCGGTC
CCACCAGGTCGTGAAGGCGGCAACCGCCGTCACAGCCGGTGGGTCTCTGT
TGGTCCTCTCTGGCTTAACCATGGCTGGGACTGTCATTGCACTGACCATT
GCTACTCCACTGCTAGTCATTTGTAGTCCTGTTCTTGTCCCTGCGGTTAT
CACCGTTTCTCTTCTCATCATGGGGTTCTTGGCCTCTGGCGGATTCGGTG
TAGCAGCCATCAGCGTCTTATCATGGATTTATAGGTATGTCACTGGGGGG
CACCCACCAGGGGCGGATCAGCTGGAGCAGGCGCGGATGAAGCTGGCCGG
TAAGGCTAGGGAGATGAGGGACAGGGCTGAGCAGTTTGGGCAGCAGCAAA
TCACTGGCTCGCAGCAGGGTTCTTAAACTGCGTTGTTATGCATGTGATGA
AGGGTTGTTGTTGGTTGATAAAGATATGGGTGAAGATCAAACGGCTATGA
TACTAGTTGAGGGGTCATTGGTTGTCTTTTGTGTTAATTTTCTTGTTAAT
TTGTGCCAATGTGTTTTTTCCTTTTTGTATTCGTGGTAATCTCTGTAATA
AGTTTTGTTAATGTGGTGGGGCGCTCCTGCAGGGTTTTTGTTATTGGTCT
TTGAAATGTAAAAAAAA
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