CX046761
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046761 vs. ExPASy Swiss-Prot
Match: ELV1B_XENLA (ELAV-like protein 1-B OS=Xenopus laevis GN=elavl1-B PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11 Identity = 42/149 (28.19%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 217 MDETFLHNCFSHTGQVVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTDQPFRLNWATFSGSDRR--TEACSDLSIFVGDLAPDVTDSILQETFSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNG 657 M + L + FS G+V + K+IR+K G S GYGFV + + AE+ + + +G RL T S R +E D ++++ L +T +++ F + + ++V++D TG ++G F+RF +E A+ NG Sbjct: 31 MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNG---------LRLQSKTIKVSFARPSSETIKDANLYISGLPRTMTQKDVEDMF-LPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNG 169
BLAST of CX046761 vs. ExPASy Swiss-Prot
Match: NUCL_RAT (Nucleolin OS=Rattus norvegicus GN=Ncl PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11 Identity = 63/216 (29.17%), Postives = 95/216 (43.98%), Query Frame = 1 Query: 160 NNFTNDETKTIWIGDLFHWMDETFLHNCFSHTGQVVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTDQPFRLNWATFSGSDRRTEACSDLSIFVGDLAPDVTDSILQETFSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQSDG 807 N+ + E+KT+ + +L + E L F + +KV +N G+S+GY F+EF S A++ L S + M + RL GS S ++FV L+ D T+ L+E+F SV+ A+++ D TG +KG+GFV F E + A M + +D A PK G GG G G R G G Sbjct: 481 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNPH-GKSKGYAFIEFASFEDAKEALNSCNK--MEIEGRTIRLELQGPRGSPNARSQPSK-TLFVKGLSEDTTEETLKESFEG---SVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGR--------GGGRGGFGGRGGGRGGRG 677
BLAST of CX046761 vs. ExPASy Swiss-Prot
Match: SXL_DROME (Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 48/188 (25.53%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 148 NGSNNNFTND---ETKTIWIGDLFHWMDETFLHNCFSHTGQVVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTDQPFRLNWATFSGSDRRTEACSDLSIFVGDLAPDVTDSILQETFSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVY--CSSRPMRIDVA 696 +G +++ ND + + L M + L+ F G + +++R+ +TG S GY FV+F S +++ ++ +G + N + ++++A G E+ D +++V +L +TD L +T KY S+ ++ D TGR +G FVR+ E A++ +N V S+P+ + +A Sbjct: 110 SGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRN--KRLKVSYARPGG-----ESIKDTNLYVTNLPRTITDDQL-DTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 289
BLAST of CX046761 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 46/181 (25.41%), Postives = 87/181 (48.07%), Query Frame = 1 Query: 175 DETKTIWIGDLFHWMDETFLHNCFSHTGQVVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTDQPFRLNWATFSGSDRRTEACSDLSIFVGDLAPDVTDSILQETFSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASG 717 DE +++G L + L F G +++ V++N ++G+S G+GFV F VLQ+ +L T P N T ++ + +F+G L +VT++ L+ TF ++Y V ++ D +++G+GF+ F +E+ +T + + + + I A P+ SG Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTL----QKPKKGGGYKVFLGGLPSNVTETDLR-TFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEH-VTNERYINLNGKQVEIKKAEPRDGSG 178
BLAST of CX046761 vs. ExPASy Swiss-Prot
Match: SXL_DROSU (Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11 Identity = 44/162 (27.16%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 217 MDETFLHNCFSHTGQVVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTDQPFRLNWATFSGSDRRTEACSDLSIFVGDLAPDVTDSILQETFSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVY--CSSRPMRIDVA 696 M + L+ F G + +++R+ +TG S GY FV+F S +++ ++ +G + N + ++++A G E+ D +++V +L +TD L +T KY S+ ++ D TGR +G FVR+ E A++ +N V S+P+ + +A Sbjct: 138 MTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRN--KRLKVSYARPGG-----ESIKDTNLYVTNLPRTITDDQL-DTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 291
BLAST of CX046761 vs. ExPASy Swiss-Prot
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11 Identity = 62/229 (27.07%), Postives = 102/229 (44.54%), Query Frame = 1 Query: 160 NNFTNDETKTIWIGDLFHWMDETFLHNCFSHTGQVVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSL----------MPNTDQPFRLN-WATFSGSDRRTEACSDLSIFVGDLAPDVTDSILQETFSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSN--GARVQGSQSDG 807 NN DE +++G L + L + FS G+VV+ ++++K T QS G+GFV+F VL S +L P QP R + + RTE IFVG + + ++ L+E F +++ V +I D+ R +G+GF+ F DE +A+ M+ + + + A P+ + G PGSN G+R S ++G Sbjct: 2 NNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYF-NRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKRAEPRDSKSQ----------TPGPPGSNQWGSRAMQSTANG 218 The following BLAST results are available for this feature:
BLAST of CX046761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046761 ID=CX046761; Name=CX046761; organism=Citrus sinensis; type=EST; length=855bpback to top |