CX046758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23 Identity = 61/131 (46.56%), Postives = 73/131 (55.73%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G ++F FDLGGHQ ARR+W ER AESK + VPFL+LGNKID A E EL+ LGL N TTGK L + RP+EVFM S+V +MGYG+GFKWLS +I Sbjct: 62 GSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYN-TTGKDVTKLPEGQ-RPIEVFMVSVVMRMGYGEGFKWLSSFI 190
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.893e-22 Identity = 61/131 (46.56%), Postives = 70/131 (53.44%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G IKF FDLGGH ARR+W ERF E++ NVPF VLGNKID P A E ELR LGL N TTG K+ RP+E+FMCS+V K GY + FKWLS+YI Sbjct: 65 GNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKIE----GQRPIELFMCSVVMKSGYSEAFKWLSEYI 190
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.228e-22 Identity = 53/131 (40.46%), Postives = 73/131 (55.73%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G I F +DLGGH ARRVW ER ES+ A+VP L+LGNKID P A E++L++ L + + TGKG V+ + RP+EVFMCS++++ GYG+G +WL QY+ Sbjct: 63 GGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL 193
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.227e-21 Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G I+FK FDLGGH++AR++W RF ES++ A P L+L NK+DI A E + G+ + TGKG NL S+ RPLEVF CS++ + GY DGFKWLS+Y+ Sbjct: 62 GSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLR-SDQRPLEVFPCSVINRFGYTDGFKWLSKYL 191
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.569e-21 Identity = 58/131 (44.27%), Postives = 70/131 (53.44%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G IKF FDLGGH ARR+W ERF E++ VPF++LGNKID P A E ELR LGL N TTG ++ RP+E+FMCS+V K GY + F+WLSQYI Sbjct: 65 GSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLN-TTGDARIE----GQRPVELFMCSVVMKSGYLEAFQWLSQYI 190
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.662e-21 Identity = 58/131 (44.27%), Postives = 71/131 (54.20%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G IKF FDLGGH ARR+W ERF E++ +VPF++LGNKID P A E ELR LGL N TTG ++ RP+EVFMCS+V + GY + F+WLSQYI Sbjct: 65 GNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRIE----GQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.731e-20 Identity = 56/131 (42.75%), Postives = 70/131 (53.44%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G IKF FDLGGH ARR+W +RF E++ +VPF++LGNKID A E ELR LGL N TTG ++ RP+EVFMCS+V + GY + F+WLSQYI Sbjct: 64 GNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLN-TTGSQRIE----GQRPVEVFMCSVVMRNGYLEAFQWLSQYI 189 The following BLAST results are available for this feature:
BLAST of CX046758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046758 ID=CX046758; Name=CX046758; organism=Citrus sinensis; type=EST; length=760bpback to top |