CX046754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL36A_HUMAN (60S ribosomal protein L36a OS=Homo sapiens GN=RPL36A PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38 Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL36A_BOVIN (60S ribosomal protein L36a OS=Bos taurus GN=RPL36A PE=3 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38 Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_AEDTR (60S ribosomal protein L44 OS=Aedes triseriatus GN=RpL44 PE=3 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 8.983e-38 Identity = 70/101 (69.31%), Postives = 85/101 (84.16%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPK ++TYCK +C+ H +HKVTQYKK K+ A+QG+RRYDRKQ G+GGQTKP+F KKAKTTKKIVLR++C CK+ Q P+KRCKHFE+GGDKK KG Sbjct: 1 MVNVPKQRRTYCK--KCKVHRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAKTTKKIVLRMECVDCKYRKQTPLKRCKHFELGGDKKRKG 99
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL36L_HUMAN (60S ribosomal protein L36a-like OS=Homo sapiens GN=RPL36AL PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 8.983e-38 Identity = 76/103 (73.79%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQG+RRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL36L_PONAB (60S ribosomal protein L36a-like OS=Pongo abelii GN=RPL36AL PE=3 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 2.614e-37 Identity = 75/103 (72.82%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQG+RRYDRK+SGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL36A_DICDI (60S ribosomal protein L36a OS=Dictyostelium discoideum GN=rpl36a PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.434e-35 Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = -1 Query: 215 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK 514 MVN+PK +KT+C +C KHT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLR++C C + Q +KRCK FE+GG+KK K Sbjct: 1 MVNIPKARKTHCV--KCNKHTPHKVTQYKAGKPSLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRMEC-SCGYKKQQVLKRCKRFELGGEKKSK 97
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_PLAF7 (60S ribosomal protein L44 OS=Plasmodium falciparum (isolate 3D7) GN=RPL44 PE=3 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 1.873e-35 Identity = 69/101 (68.32%), Postives = 83/101 (82.18%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT+KTYC +K C+KHT+HKV+QYKKGK+ L++ G+RRYD KQ G+GGQTKPVF KKAKTTKKIVL+L+C CK +KRCK FE+G DKK KG Sbjct: 1 MVNVPKTRKTYCSNK-CKKHTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKKKAKTTKKIVLKLECTKCKKKRFQTMKRCKTFEMGADKKKKG 100
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL36A_PAPAN (60S ribosomal protein L36a OS=Papio anubis GN=RPL36A PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34 Identity = 72/103 (69.90%), Postives = 80/103 (77.67%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++T+CK + KH HKVTQYKKGKDSL A GKRRYDRKQSGYGG TKP+F KKAKTTKKIVLRL+C C+ KRCKHFE+GGDK KG Sbjct: 1 MVNVPKTRQTFCKKYD--KHQPHKVTQYKKGKDSLYALGKRRYDRKQSGYGGHTKPIFWKKAKTTKKIVLRLECVEPNCRSERMLATKRCKHFELGGDKTRKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_TRYBB (60S ribosomal protein L44 OS=Trypanosoma brucei brucei GN=RPL44 PE=3 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 1.938e-32 Identity = 64/98 (65.31%), Postives = 73/98 (74.49%), Query Frame = -1 Query: 221 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKK 514 MVN PK KK +C + C H KV QYK GK L A+GKRRYDRKQSGYGGQTKP+FHKKAKTTKKIVL+LQC CK + Q+ +KR KHFE+ KK Sbjct: 1 MVNYPKKKKMHCPDERCNAHKSFKVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHKKAKTTKKIVLKLQCSNCKSIIQNVLKRTKHFELNDKKK 98
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_ENCCU (60S ribosomal protein L44 OS=Encephalitozoon cuniculi GN=RPL44 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.955e-29 Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVN+PKT+ T+CK +C+ ++ HKV+Q KK KD+ AQG RRY RKQ GYGGQTKP+ +KAK TKK+VL L+C CK Q P+KR KH GG++K KG Sbjct: 1 MVNIPKTRNTFCK--KCKGYSAHKVSQAKKSKDNPRAQGNRRYARKQRGYGGQTKPILRRKAKVTKKLVLNLECTKCKFSHQKPLKRAKHVIFGGERKRKG 99 The following BLAST results are available for this feature:
BLAST of CX046754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046754 ID=CX046754; Name=CX046754; organism=Citrus sinensis; type=EST; length=562bpback to top |