DN618350

Overview
NameDN618350
Unique NameDN618350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.016e-50
Identity = 102/199 (51.26%), Postives = 128/199 (64.32%), Query Frame = 3
Query:   18 EKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR---KNAKVVTIDDYEDVPLNDEKAL 602
            EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R    +  VV ID ++DVP N E+ L
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDL 259          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.032e-45
Identity = 94/197 (47.72%), Postives = 123/197 (62.44%), Query Frame = 3
Query:    3 YNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDE 593
            Y  + EK  RFEIFKDNL +IDE N +N +Y +GLN FADL+N+E+   Y+G+   A   +++    + ++      LP++VDWRKKGAV  V+ QGSCGSCWAFS +A VEGINKI TG L+ LSEQELVDC+   + GC GG   YA E++  N GI     YPYKA  G+C   +    +V       V  N+E
Sbjct:   59 YENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDA---TIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNE 250          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.760e-45
Identity = 97/198 (48.99%), Postives = 131/198 (66.16%), Query Frame = 3
Query:    3 YNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKR-TSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDE 593
            Y ++ EK  RFEIF+DNL +IDE N +N +Y +GLN FADL+N+E++  Y+G  F A+  T L+   ++ +  +     P S+DWR KGAV  VK+QG+CGSCWAFSTIA VEGINKIVTG+L+ LSEQELVDCD  ++ GC GG    + +++ +N G+ T + YPY+A    C    K    V I  Y+ VP N E
Sbjct:   59 YESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVG--FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCE 252          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 5.661e-44
Identity = 90/191 (47.12%), Postives = 120/191 (62.83%), Query Frame = 3
Query:   30 RFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 602
            R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ YLG +F A  +SL   + ++       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+DC T  N GC+GGLM YAFE+II+N GIDTE  YPYKA +G C+ Y+      T+  Y+ V    E +L
Sbjct:   49 RYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE-NSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCE-YKSENSGATLSSYKTVTAGSESSL 232          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.661e-44
Identity = 98/207 (47.34%), Postives = 123/207 (59.42%), Query Frame = 3
Query:    3 YNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 602
            Y    E+E R  I++ NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IIDNGGI+ +  YPYKA D  C    KN +  T   Y  +P  DE AL
Sbjct:   47 YKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSKN-RAATCSRYIQLPFGDEDAL 247          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.068e-42
Identity = 92/206 (44.66%), Postives = 123/206 (59.71%), Query Frame = 3
Query:    3 YNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 602
            Y    E+  R  I++ NL+F+  HN E+     +Y +G+N   D+T EE  S+      G+ R   + +R+  Y     + LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID+E  YPYKA++G C  Y    +  T   Y ++P   E AL
Sbjct:   39 YKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISL-----MGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKC-RYDSKKRAATCSKYTELPFGSEDAL 238          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.068e-42
Identity = 96/209 (45.93%), Postives = 127/209 (60.77%), Query Frame = 3
Query:    6 NALGEKEKRF--EIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAK---RTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 602
            N   E E+RF  +IF +N   I +HN        ++K+ +N++ADL + E+R +  G  +      R + +S +   ++      LP SVDWR KGAV  VKDQG CGSCWAFS+  A+EG +   +G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY+AID SC  + K     T   + D+P  DEK +
Sbjct:   69 NYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCH-FNKGTVGATDRGFTDIPQGDEKKM 276          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.057e-42
Identity = 82/125 (65.60%), Postives = 100/125 (80.00%), Query Frame = 3
Query:  228 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 602
            + LPDS+DWR+KGAV  VK+QG CGSCWAF  IAAVEGIN+IVTG LISLSEQ+LVDC T  N GC GG    AF++II+NGGI++EE YPY   +G+CDT ++NA VV+ID Y +VP NDEK+L
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCSTR-NHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTNGTCDT-KENAHVVSIDSYRNVPSNDEKSL 123          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.542e-41
Identity = 91/206 (44.17%), Postives = 125/206 (60.68%), Query Frame = 3
Query:    3 YNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 602
            Y    E+  R  I++ NL+ +  HN E+     +Y++G+N   D+T+EE  S+       + R   +  R+  Y     + LPDS+DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++IIDN GID+E  YPYKA+DG C    KN +  T   Y ++P   E+AL
Sbjct:   39 YKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL-----MSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKN-RAATCSRYIELPFGSEEAL 238          
BLAST of DN618350 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.013e-41
Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 3
Query:   30 RFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK-AIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 602
            R+E FK N+ ++   NS+     +GLN+ ADL+NEEYR  YLG R   K      +     L R     P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++EE YPY+  ++  C  +++ +    I  Y+++   DE  L
Sbjct:   53 RYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDEC-KFQEGSVAAKITSYKEIEAGDENDL 244          
The following BLAST results are available for this feature:
BLAST of DN618350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CYSP1_HORVU9.016e-5051.26Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
PAPA3_CARPA1.032e-4547.72Caricain OS=Carica papaya PE=1 SV=2[more]
PAPA2_CARPA1.760e-4548.99Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP5_DICDI5.661e-4447.12Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATS_MOUSE5.661e-4447.34Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATS_CANFA1.068e-4244.66Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL_DROME1.068e-4245.93Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CPGP1_ZINOF4.057e-4265.60Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATS_BOVIN1.542e-4144.17Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CYSP3_DICDI2.013e-4145.08Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02H04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618350 ID=DN618350; Name=DN618350; organism=Citrus sinensis; type=EST; length=603bp
CTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGAC
AATCTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGT
TGGGTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGT
ATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGG
AGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGA
TTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTG
GGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAG
ATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTG
TGATACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCAT
TCGAGTTCATTATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCC
TACAAAGCCATTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGT
AGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTT
TGC
back to top