DN618344

Overview
NameDN618344
Unique NameDN618344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_MEDSA (Translationally-controlled tumor protein homolog OS=Medicago sativa GN=TCTP PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 1.339e-55
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            MLVYQDLLTGDELLSDS+PYKE ENG+LWEVEGKWV +G V+VDIGAN S               KVVDIVD FRLQEQPAFDKKQF+ ++KR+IKLLTPKL  E+QE+FKK+IEGATK+LL KL DLQFFVGESMHDDG LVFAY
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANASAEGGEDEGVDDTAV-KVVDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKLDAEKQELFKKHIEGATKYLLCKLKDLQFFVGESMHDDGSLVFAY 145          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 1.339e-55
Identity = 106/146 (72.60%), Postives = 117/146 (80.14%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            MLVYQD L+GDELLSDSFPY+E ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQF+ Y+KR+IK LT KL  E  + FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAY
Sbjct:    1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAY 146          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.284e-55
Identity = 109/146 (74.66%), Postives = 119/146 (81.51%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            M+VYQDLL+GDELLSDSFPYKE  NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKKQF+ ++KR+IK L  KLSEERQ  FKKN+EGA K L+SKLSDLQFFVGESMHDDG +VFAY
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEEGVKIRLV-KVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAY 145          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 8.677e-55
Identity = 104/146 (71.23%), Postives = 119/146 (81.51%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            MLVYQD L+GDELLSDSFPY+E ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQF+++MKR+IK L+ KL  +  ++FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAY
Sbjct:    1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAY 146          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.307e-54
Identity = 103/146 (70.55%), Postives = 114/146 (78.08%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            MLVY DLLTGDELLSDSFPYKE ENGILWEVEGKW  +G V+V+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKL+ E+QE FKK IEGATKFLL KL D QFFVGE MHDD  +VFAY
Sbjct:    1 MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGVDDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAY 146          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 5.625e-54
Identity = 105/146 (71.92%), Postives = 118/146 (80.82%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            MLVYQDLL+GDEL SDSF Y E  NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQP+FDKKQFV YMK++IK LTPKL  E++E+FK NI+GATK+LLSKLSDLQFFVGESM DD  +VFAY
Sbjct:    1 MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAY 146          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.821e-51
Identity = 99/146 (67.81%), Postives = 114/146 (78.08%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            MLVYQDL++GDELLSDSFPYKE ENG++WEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQP+ DKK F++ +K++IK LTP L  E+QE FK  IEGA K+LL K+ DLQFFVGESM DD  +VFAY
Sbjct:    1 MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAY 146          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.928e-51
Identity = 102/146 (69.86%), Postives = 112/146 (76.71%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            MLVYQDLL+GDELLSDSF YKE ENG+LWEVEGKWV QG VDVDIGANPS               KVVDIVDTFRLQEQP FDKK FV+Y+K++IK LT  L  E+ + FKK +EGATKFLLSKL DLQFFVGESM DD  + FAY
Sbjct:    1 MLVYQDLLSGDELLSDSFTYKELENGVLWEVEGKWVTQGPVDVDIGANPSAEGGEDESVDDTAV-KVVDIVDTFRLQEQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAY 145          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.115e-20
Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG--CLV 507
            ML+YQD+LTGDE++SD+FP KE    I +EV+   ++    DVDIG NPS               +V ++V +FRLQ   +FDKK ++TY+K ++K +  KL E   +R   F+K  +   K +++   D +F++GESM+ DG  CL+
Sbjct:    1 MLIYQDVLTGDEMISDAFPIKEI-GDIAYEVDCANIIIKEGDVDIGGNPS--AEEAAEALEEGAQQVNNVVHSFRLQ-STSFDKKSYLTYLKGYMKAIKSKLQESNPDRVAAFEKGAQDFAKKIVANFKDYEFYIGESMNPDGMVCLL 144          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.063e-20
Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE--ERQEIFKKNIEGATKF----LLSKLSDLQFFVGESMHDDGCLV 507
            ML+Y D+L GDEL+SDS+  KE + GI++E +   + +GAV+V+IGAN S               KV +IV++FRLQ    FDKK ++ Y+K ++K +  KL E     E  K    GA+KF    ++ K  D +F+ GESM  DG +V
Sbjct:    1 MLIYNDILNGDELISDSYDLKEVD-GIVYEADCAMIEEGAVEVNIGANAS--AEEAAEDLDDGAVKVNNIVNSFRLQ-STTFDKKSYLAYLKGYMKAIKAKLQENGSSAEDIKAFETGASKFVKDTIVPKFKDFEFYTGESMDPDGMVV 145          
The following BLAST results are available for this feature:
BLAST of DN618344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
TCTP_MEDSA1.339e-5573.97Translationally-controlled tumor protein homolog O... [more]
TCTP_HORVU1.339e-5572.60Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ2.284e-5574.66Translationally-controlled tumor protein homolog O... [more]
TCTP_WHEAT8.677e-5571.23Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL4.307e-5470.55Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC5.625e-5471.92Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME5.821e-5167.81Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE9.928e-5169.86Translationally-controlled tumor protein homolog O... [more]
TCTP_CRYNE3.115e-2039.19Translationally-controlled tumor protein homolog O... [more]
TCTP_GIBZE9.063e-2040.27Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618344 ID=DN618344; Name=DN618344; organism=Citrus sinensis; type=EST; length=517bp
CTGCGTCTCTCTCTCTCTCTCTCCAGTTTTCTCCGTTGATTATTTTTCTT
TTTTGTGTTCGCGAGAGAGACTGCAATCATGTTGGTCTATCAAGATCTCC
TCACCGGTGATGAGCTTCTCTCCGACTCTTTTCCCTACAAGGAAACTGAG
AATGGGATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTACAAGGAGCCGT
TGATGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATG
AGGGTGTTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTC
AGGCTGCAGGAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACAT
GAAGAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGG
AGATATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCTTGCTCTCGAAG
CTCAGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCATGATGATGGCTG
TCTTGTCTTTGCTTACT
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