DN618343

Overview
NameDN618343
Unique NameDN618343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_SCHPO (Translationally-controlled tumor protein homolog OS=Schizosaccharomyces pombe GN=p23fy PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.157e-12
Identity = 38/116 (32.76%), Postives = 63/116 (54.31%), Query Frame = -3
Query:  227 DEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 565
            D +E  ++    V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct:   53 DAEENAEEGTETVNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167          
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_RABIT (Translationally-controlled tumor protein OS=Oryctolagus cuniculus GN=TPT1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12
Identity = 39/116 (33.62%), Postives = 62/116 (53.45%), Query Frame = -3
Query:  224 EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 562
            E EG +   +  VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QF++GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   58 EGEGTESTVITGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_LONON (Translationally-controlled tumor protein homolog OS=Lonomia obliqua GN=Tctp PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = -3
Query:  227 DEDEGVDDQAVKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 565
            + DEG D      VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ +IFK N+    K +L++  +LQFF GESM  DG +    Y+  +    P  ++    L+E K
Sbjct:   53 EADEGTDSNVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKELQFFTGESMDCDGMVAMMEYRKVDETEIPIMMFFKHGLEEEK 171          
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_CHICK (Translationally-controlled tumor protein homolog OS=Gallus gallus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11
Identity = 38/116 (32.76%), Postives = 61/116 (52.59%), Query Frame = -3
Query:  224 EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 562
            E EG +   +  VDIV    LQE  +F K+ +  Y+K ++K +  +L E + E  K  + GA    K +L+   + QFFVGE+M+ DG +    ++E    P  ++  D L+  KC
Sbjct:   58 EGEGTEATVITGVDIVINHHLQET-SFTKESYKKYIKDYMKAIKARLEEHKPERVKPFMTGAAEQIKHILANFKNYQFFVGENMNPDGMVALLDFREDGVTPYMIFFKDGLEIEKC 172          
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_SCHJA (Translationally-controlled tumor protein homolog OS=Schistosoma japonicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11
Identity = 36/118 (30.51%), Postives = 60/118 (50.85%), Query Frame = -3
Query:  227 GADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 571
            G +  E V D   +V+D+V   RL    +FDKK +  Y+K ++K +  +L +E  E   IF+  I      +     D + ++GESM+ DG +    ++E    P F+++ D L E K
Sbjct:   52 GEEGQEEVSDSTERVIDLVHASRLVST-SFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFDDYEHYIGESMNPDGMVALMNFRENGVTPYFVFLKDGLIEEK 168          
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_DEBHA (Translationally-controlled tumor protein homolog OS=Debaryomyces hansenii GN=DEHA2E17468g PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11
Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = -3
Query:  266 EGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF---LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 556
            E ++D    V ++V +FRLQ Q +FDKK F+TYMK ++K +   L+E+  E  +    GA  +   ++S   D  F+ GESM  DG +V   Y+E  T P
Sbjct:   55 EDLEDGTETVNNVVYSFRLQ-QTSFDKKSFMTYMKGYMKRVKAHLAEKNPEAIEAFENGAKTYFKKVVSSFGDWDFYTGESMDPDGMVVLLNYREDGTTP 153          
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_CANGA (Translationally-controlled tumor protein homolog OS=Candida glabrata GN=CAGL0L12870g PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = -3
Query:  266 DEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEI---FKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 565
            D ++ V+D    V ++V +FRLQ    FDKK F+TY+K ++K +  KL E+  +    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:   52 DGEDDVEDGTEVVNNVVHSFRLQPT-GFDKKSFLTYIKGYMKAVKAKLQEKNPDAIPTFEKGAQVYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
BLAST of DN618343 vs. ExPASy Swiss-Prot
Match: TCTP_CANAL (Translationally-controlled tumor protein homolog OS=Candida albicans GN=TMA19 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11
Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = -3
Query:  227 DEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 565
            D +E ++D A  V ++V +FRLQ    FDKK F TY+K ++K +   L+E   +  E F+K      K +L    D +F+ GESM  D  +V   Y+E  T P        +KE K
Sbjct:   52 DGEEALEDGAETVNNVVYSFRLQPT-MFDKKSFTTYIKGYMKRIKAYLAENDPDSVEAFEKGATAYVKKVLGSFKDWEFYTGESMDPDAMVVLLNYREDGTTPYVAIWKHGVKENK 166          
The following BLAST results are available for this feature:
BLAST of DN618343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
TCTP_SCHPO5.157e-1232.76Translationally-controlled tumor protein homolog O... [more]
TCTP_RABIT6.735e-1233.62Translationally-controlled tumor protein OS=Orycto... [more]
TCTP_LONON6.735e-1236.97Translationally-controlled tumor protein homolog O... [more]
TCTP_CHICK5.702e-1132.76Translationally-controlled tumor protein homolog O... [more]
TCTP_SCHJA9.726e-1130.51Translationally-controlled tumor protein homolog O... [more]
TCTP_DEBHA9.726e-1138.00Translationally-controlled tumor protein homolog O... [more]
TCTP_CANGA9.726e-1135.92Translationally-controlled tumor protein homolog O... [more]
TCTP_CANAL9.726e-1135.34Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618343 ID=DN618343; Name=DN618343; organism=Citrus sinensis; type=EST; length=573bp
CTTTTTTTTTACAAAAACTATTAAGTTATTCTGGTAATTCAATCTCAAAC
CATAAAACCCAATAATTAGGAGCAGAAAAACATATTGTTTATGTCAAAAT
AAAAACTAAAAAACAGCAAGCACAAGTCCCGAGTAAACCAGTACAAAAGA
TACATAAAAATAACCGCGGGCAATAATTAAAACTAGAACTACAGCAGGCA
CTTCCTCTTCGAAGCCCGGCTTAGCACTTCACCTCCTTCAATGCATCAGC
AATATACAAAAATGTTGGGTCGGTCGCACCTTCCTTGTAGTAAGCAAAGA
CAAGACAGCCATCATCATGCATGCTCTCCCCAACAAAGAATTGAAGGTCA
CTGAGCTTCGAGAGCAAGAACTTGGTCGCTCCCTCAATATTCTTCTTAAA
TATCTCCTGCCTCTCCTCACTCAGCTTGGGCGTCAGCAACTTGATGAATC
TCTTCATGTATGTTACAAACTGCTTCTTGTCAAAAGCAGGTTGCTCCTGC
AGCCTGAATGTGTCGACAATGTCGACCACCTTCACGGCTTGGTCATCAAC
ACCCTCATCCTCATCAGCTCCTT
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