DN618330

Overview
NameDN618330
Unique NameDN618330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.596e-21
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 3
Query:  234 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            L F  +  ++ K Y S+EE   R   F  N   I + N    +++LGLN+F+D S++E +   L +  QNCSAT KGN+       P + DWR+ G  VSPVK+QG CGSCWTFSTTG+LE+A   A GK +SL
Sbjct:   33 LHFKSWMVQHQKKY-SLEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQNCSAT-KGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSL 164          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 55/139 (39.57%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  231 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A  + +SL
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSL 173          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 55/139 (39.57%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  231 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A  + +SL
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSL 173          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.777e-20
Identity = 54/132 (40.91%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--LTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  F  ++ K Y + EE   RF  F  NL   +    +  +   G+ KF+D +  EF+R  LG  +             L    LPE  DWRE G V+PVKDQG CGSCW FSTTG+LE A++ A GK +SL
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSL 179          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.777e-20
Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 617
            F  +  ++ K Y S EE   R   F+ NL  I + N +  ++++GLN+F+D S++E +R  L +  QNCSAT K N+       P + DWR+ G  V+PVK+QG CGSCWTFSTTG+LE+A   A GK
Sbjct:   35 FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSEPQNCSAT-KSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGK 160          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.627e-20
Identity = 56/132 (42.42%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  + +++ K Y S  E   R   F+ N   I++ N +  ++++GLN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G +VSPVK+QG CGSCWTFSTTG+LE+A   A GK ++L
Sbjct:   33 FTSWMKQHQKTYSS-REYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTL 162          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19
Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 590
            F  +   + K YE+VEE  LRF  F  NL  I  TN KG SY LGLN+FAD S EEF++  LG   +     +            + +P++ DWR+ G V+ VK+QG CGSCW FST  ++E
Sbjct:   51 FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVE 172          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 1.800e-19
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G  VSPVK+QG CGSCWTFSTTG+LE+A   A GK +SL
Sbjct:   35 FKSWMSKHRKTY-STEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSL 164          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  207 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATT-KGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            Q   + ++  +F  +   + K Y S EE   R+  F  N+D ++  N KG    LGLN FAD + EE++   LG   + S+       K+       +KDWR  G V+PVK+QG CG CW+FSTTGS E A+ Q+ G+ +SL
Sbjct:   19 QQFSELQYRNAFTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLIGTQEEKVFTTSSAASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSL 159          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19
Identity = 56/132 (42.42%), Postives = 81/132 (61.36%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  + +++ K Y SVE    R   F+ N   I++ N +  ++++ LN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G +VSPVK+QG C SCWTFSTTG+LE+A   A GK +SL
Sbjct:   33 FKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSEPQNCSAT-KSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSL 162          
The following BLAST results are available for this feature:
BLAST of DN618330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CATH_PIG5.596e-2145.52Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
LMCPB_LEIME2.126e-2039.57Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI2.126e-2039.57Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CYSP_PEA2.777e-2040.91Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATH_BOVIN2.777e-2044.53Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATH_RAT3.627e-2042.42Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
XCP2_ARATH1.055e-1942.62Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CATH_HUMAN1.800e-1943.94Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CYSP5_DICDI2.351e-1938.03Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATH_MOUSE2.351e-1942.42Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618330 ID=DN618330; Name=DN618330; organism=Citrus sinensis; type=EST; length=630bp
CGAAGCCCTTGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCA
TTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCA
ATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCC
GTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTT
TGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCC
GGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGT
AAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTG
GGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCA
CTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAA
GACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTG
TGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACC
ACCAGGCCTTTGGAAAGGGTATCTCTTTGT
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