DN618330

Overview
NameDN618330
Unique NameDN618330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.934e-19
Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLT---ADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 590
            F  +  ++ KIY++++E   RF  F  NL  I  TN K  SY LGLN FAD S +EF+    G+      TT+ +++      DV +PE  DWR+ G V+PVK+QG CGSCW FS   ++E
Sbjct:   48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIE 168          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18
Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  +   + K YE+V+E   RF  F  NL+ I  TN K  SY LGLN+FAD S +EF    +G+  + +     + +   +    LPE  DWR+ G V+PV+ QG CGSCW FS   ++E       GK + L
Sbjct:   48 FNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVEL 180          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.524e-18
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK----GNHK---LTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 617
            F  F +R+GK Y+  +E   R + F  NL   R       S   G+ KF+D +  EF+R  LG  ++  A  +      H+   L  D LP+  DWR+ G V PVK+QG CGSCW+FS +G+LE A++ A GK
Sbjct:   48 FLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGK 180          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.395e-18
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  234 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            + FA F ++YGK+Y+  +E   RF  F +N++  +           G+  F+D + EEF+ R+R GA+   +A  +      +T    P   DWRE G V+PVK QG CGSCW FST G++E  +  A    +SL
Sbjct:   39 MRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSL 173          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.395e-18
Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  198 SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 614
            S  Q   + ++  +F  + + + + Y S EE   R+  F  N+D +   N KG    LGLN FAD + +E++   LG   + SA      +        T DWR  G V+P+K+QG CG CW+FSTTGS E A+  A G
Sbjct:   16 SAKQQFSELQYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEEKIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASG 153          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.395e-18
Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  219 QARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR-LGLNKFADWSWEEFQRHRLGAAQNCSATT--KGNHKLTADVL---PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            ++++  +F  +  ++ + Y S  E   R++ F  N+D + + N KG S   LGLN FAD + EE+++  LG   N  +     G   L  + L   P++ DWR    V+P+KDQG CGSCW+FSTTGS E A+     K +SL
Sbjct:   29 ESQYRTAFTEWTLKFNRQYSS-SEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSL 170          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.434e-18
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQ-----NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 590
            F  +   + K Y+SVEE   RF  F +NL  I   N +  SY LGLN+FAD + EEF+   LG A+         +    ++   D LP++ DWR+ G V+PVKDQG CGSCW FST  ++E
Sbjct:   51 FESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDITD-LPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVE 171          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18
Identity = 51/120 (42.50%), Postives = 67/120 (55.83%), Query Frame = 3
Query:  279 SVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            S+ E   RF  F  NL  +   N K LSYRLGL +FAD + +E++   LGA        + + +  A   D LPE+ DWR+ G V+ VKDQG CGSCW FST G++E       G  I+L
Sbjct:   65 SLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITL 184          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLG--AAQNCSATTKGNHKLT---ADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 590
            F  +  ++ KIYES++E   RF  F  NL  I  TN K  SY LGLN FAD S +EF++  +G  A          N   T       P++ DWR  G V+PVK+QG CGSCW FST  ++E
Sbjct:   48 FDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVE 169          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.874e-17
Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = 3
Query:  207 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 617
            Q + +  +  +F  +   + + Y S EE   R+  F  N+D +   N KG    LGLN FAD S EE++   LG   + S+          D   +  DWR  G V+P+K+QG CG CW+FSTTG+ E A + A GK
Sbjct:   19 QQLSEVEYRNAFTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTPFDASSLEMTESDKIFDASAQV-DWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGK 153          
The following BLAST results are available for this feature:
BLAST of DN618330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PAPA1_CARPA8.934e-1942.15Papain OS=Carica papaya PE=1 SV=1[more]
PAPA3_CARPA1.167e-1838.35Caricain OS=Carica papaya PE=1 SV=2[more]
CYSP1_MAIZE1.524e-1839.10Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP_TRYBB3.395e-1836.30Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CYSP4_DICDI3.395e-1835.97Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CYSP2_DICDI3.395e-1837.06Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
XCP1_ARATH4.434e-1842.62Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
RD21A_ARATH5.791e-1842.50Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
PAPA2_CARPA2.200e-1742.62Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP7_DICDI2.874e-1736.50Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618330 ID=DN618330; Name=DN618330; organism=Citrus sinensis; type=EST; length=630bp
CGAAGCCCTTGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCA
TTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCA
ATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCC
GTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTT
TGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCC
GGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGT
AAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTG
GGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCA
CTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAA
GACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTG
TGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACC
ACCAGGCCTTTGGAAAGGGTATCTCTTTGT
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