DN618330

Overview
NameDN618330
Unique NameDN618330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.874e-17
Identity = 57/148 (38.51%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  210 VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            V    ++  SF  + R   K Y   E M  R+  F KN+D + + N KG    LGLN+ AD S EE++ + LG   +      G HK    +         P   DWRE   V+PVKDQG CGSC++FSTTGS+E       GK +SL
Sbjct:   24 VFSHKQYQDSFIDWMRSNNKAYTHKEFMP-RYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLN--GYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSL 168          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.874e-17
Identity = 52/134 (38.81%), Postives = 70/134 (52.24%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  +  +Y K Y S +E   RF  F     +I + N K  SY+LG+N +AD S +EF  + L   +    +  G   +  D     +P T DWR    V+PVKDQG CGSCWTF +TGSLE       G+ +SL
Sbjct:  225 FKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEF--NTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSL 356          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.402e-17
Identity = 52/137 (37.96%), Postives = 71/137 (51.82%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN+FAD + EE++   LG         K + +  A   + LPE+ DWR  G V+ +KDQG CGSCW FS   ++E       G  ISL
Sbjct:   40 YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISL 176          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  207 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKG-NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 614
            Q + + ++  +F  +   + + Y S EE   RF  F  N+D I   N KG    LGLN FAD + EE++   LG   + S+     + K+   V   + DWR  G V+P+K+QG CG CW+FS TG+ E A + A G
Sbjct:   19 QQLSELQYRNAFTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANG 154          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16
Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTK-GNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  +   +G++Y + EE   R   F  N + IR  N    S   +RLGLNKFAD + +EF +  L A ++ S   K  N K+     + D  P + DWR+ G+++ VK QG CG  W FS TG++EAA+  A G  +SL
Sbjct:   44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSL 182          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16
Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 3
Query:  282 VEEMKLRFATFSKNLDLI--RSTNCKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            + +   RF  F  NL  I   + + K  +Y+LGL KF D + +E+++  LGA    A+  +     N K +A V    +PET DWR+ G V+P+KDQG CGSCW FSTT ++E       G+ ISL
Sbjct:   67 INDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISL 192          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16
Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNHKLTADVL--PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQA 608
            FA F +++G++YES  E   R + F +NL L R           G+  F+D + EEF+ R+  GAA   +A  +    +  +V+  P   DWR  G V+ VKDQG CGSCW FS  G++E  +  A
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLA 163          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16
Identity = 60/154 (38.96%), Postives = 75/154 (48.70%), Query Frame = 3
Query:  192 ETSVLQVIGQARHALS--FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            + +VL + G A  A S  +  F  +YG+ Y   EE   R   F +N   I   N K     +++ L +NKF D + EEF     G     SA     +  K T     E  DWR  G V+PVKDQG CGSCW FSTTGSLE  +    G  ISL
Sbjct:    2 KVAVLFLCGVALAAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFYPKKETGPQATEV-DWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISL 154          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/145 (35.86%), Postives = 73/145 (50.34%), Query Frame = 3
Query:  237 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--------LTADVLPETK--DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            S+  F  ++G+ Y  +EE + R   F  NL  I   N K     ++Y L +N+F+D + E+F           +A  KG  K         + D  PE+   DWR  G V+PVKDQG CGSCW FSTTG +E  +    G+ +SL
Sbjct:   19 SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-----------NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSL 152          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/127 (40.94%), Postives = 66/127 (51.97%), Query Frame = 3
Query:  264 GKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSP-VKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            GK Y  + E + RF  F  NL  I   N     SY  GLNKF+D + +EFQ   LG     ++ S   +       DVLP+  DWRE G V P VK QG CGSCW F+ TG++E       G+ +SL
Sbjct:   49 GKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSL 175          
The following BLAST results are available for this feature:
BLAST of DN618330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CYSP3_DICDI2.874e-1738.51Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CFAD_DICDI2.874e-1738.81Counting factor associated protein D OS=Dictyostel... [more]
ORYA_ORYSJ6.402e-1737.96Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP6_DICDI8.362e-1736.50Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
P34_SOYBN1.092e-1638.13P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
GCP1_ARATH1.092e-1639.68Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP_TRYCR1.092e-1637.30Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSP2_HOMAM1.426e-1638.96Digestive cysteine proteinase 2 OS=Homarus america... [more]
CYSP1_HOMAM3.177e-1635.86Digestive cysteine proteinase 1 OS=Homarus america... [more]
CPR2_ARATH3.177e-1640.94Probable cysteine proteinase At3g43960 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618330 ID=DN618330; Name=DN618330; organism=Citrus sinensis; type=EST; length=630bp
CGAAGCCCTTGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCA
TTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCA
ATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCC
GTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTT
TGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCC
GGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGT
AAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTG
GGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCA
CTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAA
GACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTG
TGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACC
ACCAGGCCTTTGGAAAGGGTATCTCTTTGT
back to top