DN618329

Overview
NameDN618329
Unique NameDN618329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19
Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = -2
Query:  293 EAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY G+D   C +  E         V++    E  L  AV  + P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E       +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  200 ESYPYLGRDTETCNYKPECSAANDTGFVDLPQ-REKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSK--DLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = -2
Query:  293 EAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY G++   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGI+T ASYP V
Sbjct:  200 ESYPYLGRETNSCTYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  293 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 679
            Y Y G    C FS+E   V + DSV ++   ++E + A  L +  P+SVA     G +FY+ G+    +   +P  ++HAV+ VGYG    VP+W IKNSWG +WG+ GY+ +  G   CG+ T AS  VV
Sbjct:  357 YSYQGHMQSCNFSAEKAKVYINDSVELS---QNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = -2
Query:  293 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 679
            Y Y G    C FS++   V + DSV ++   E+++   +    P+SVA     G +FY+ G+    +   +P  ++HAV+ VGYG    +PYW IKNSWG +WG+ GY+ +  G   CG+ T AS  VV
Sbjct:  335 YGYQGHVQTCNFSAQMAKVYINDSVELSRN-ENKIAAWLAQKGPISVAINAF-GMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 461          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19
Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = -2
Query:  290 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG--FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVVA 679
            YPY+GK+  CK + ++  V  L        +E  L+ AVG + P+S    VV G   + Y  G++  + C     +++H V  VGYG+E+G  YW+IKN+WG +WG+ GY ++     + CG+   ASYP++A
Sbjct:  197 YPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISA---VVFGKPMKSYGGGIFDDSSCLGD--NLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMASYPILA 324          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19
Identity = 56/130 (43.08%), Postives = 71/130 (54.62%), Query Frame = -2
Query:  299 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG-VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYP 679
            YPY    G CK   +NV   V  S  +T G+E  LQ  +    PV+V  +     F+ YK G +YS TKC +  M  NH V AVGYG      YW+I+NSWG +WGD GYF +     NMCGI   ++YP
Sbjct:  177 YPYKAVAGTCK-KVKNVAT-VTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMM--NHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSNNMCGIGRDSNYP 302          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 54/136 (39.71%), Postives = 80/136 (58.82%), Query Frame = -2
Query:  296 EAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 685
            E YPY  ++GVC    +N  V  +DS  ++ +  E  LQ AV   +PVS+A E     F+ YKSG+++  KCG     V+H VV  GYG E+G+ YW+++NSWG N  ++GY +++        +CG+A   SYPV
Sbjct:  103 EDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAH-QPVSIALEAGGRDFQHYKSGIFTG-KCGTA---VDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPV 233          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 58/146 (39.73%), Postives = 80/146 (54.79%), Query Frame = -2
Query:  275 AYPYTGKDGVCKFS----SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAPE 682
            AYPY    G C  +    +  V V +    ++   +E++L  AV   +PVSVA E     F FY  GV++  +CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   S P+
Sbjct:  220 AYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG-ECGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKPK 360          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 57/138 (41.30%), Postives = 74/138 (53.62%), Query Frame = -2
Query:  293 EAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY   D   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  200 ESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 57/138 (41.30%), Postives = 74/138 (53.62%), Query Frame = -2
Query:  293 EAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY   D   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  200 ESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334          
The following BLAST results are available for this feature:
BLAST of DN618329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATL1_CANFA1.246e-1940.88Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL1_PIG2.125e-1940.58Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATF_HUMAN2.125e-1938.93Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATF_MOUSE2.776e-1937.21Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATLL_PHACE3.625e-1936.09Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
ACP1_ENTHI3.625e-1943.08Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSPL_SOLLC4.734e-1939.71Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP2_HORVU4.734e-1939.73Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CATL2_BOVIN4.734e-1941.30Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_BOVIN4.734e-1941.30Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618329 ID=DN618329; Name=DN618329; organism=Citrus sinensis; type=EST; length=686bp
CCCCCTTTTTTTTTTCCTATAACAACTACCTTTGCATTGACAAAATATAT
ATAANCATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGA
TCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGAT
TATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTC
TGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTG
CTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTG
GGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATC
TTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAG
CCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCAT
GGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCA
CTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGG
TCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAA
TGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTG
CAGACACCATCTTTTCCGGTGTAGGGATATGCTTCC
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