DN618325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_HALWD (30S ribosomal protein S7P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps7p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.380e-25 Identity = 59/146 (40.41%), Postives = 92/146 (63.01%), Query Frame = -3 Query: 132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569 K+F K++ +VERL N LM N G K + IV+ A + IH T++NP+QV+V V N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G + ++++ ++ A+ LA +I AA SYA+ +K+E ERVA+A R Sbjct: 82 KQFEKSKISVVERLINRLMQTEDNTGHKQKTMNIVEDAFDTIHNRTEENPVQVLVRGVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIADGTQRGSYKSAQSAADSLAQVIIGAANYDVQSYAVGQKEESERVAEAAR 227
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_THECE (30S ribosomal protein S7P OS=Thermococcus celer GN=rps7p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.016e-25 Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = -3 Query: 132 KRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569 K F KA IVERL N +M G + KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN + A+ LA+E+I AA ++A +K+EIER+A+++R Sbjct: 54 KAFGKANVHIVERLINKVMRSGATSHKAGGHFMRRDDRSLMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALAEEIIAAANADPKTFAYSRKEEIERIAQSSR 215
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_PYRFU (30S ribosomal protein S7P OS=Pyrococcus furiosus GN=rps7p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25 Identity = 68/162 (41.98%), Postives = 92/162 (56.79%), Query Frame = -3 Query: 132 KRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569 K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +RN + AE LA+E+I AA SYA KK EIER+A+++R Sbjct: 54 KHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEQRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRNKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 215
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_PYRHO (30S ribosomal protein S7P OS=Pyrococcus horikoshii GN=rps7p PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.993e-24 Identity = 68/162 (41.98%), Postives = 91/162 (56.17%), Query Frame = -3 Query: 132 KRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569 K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISPLRR++ A+ + GA +R + AE LA+E+I AA SYA KK EIER+A+++R Sbjct: 57 KHFGKANVHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 218
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_PYRAB (30S ribosomal protein S7P OS=Pyrococcus abyssi GN=rps7p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.603e-24 Identity = 67/162 (41.36%), Postives = 91/162 (56.17%), Query Frame = -3 Query: 132 KRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569 K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +R + AE LA+E+I AA SYA KK EIER+A+++R Sbjct: 54 KHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 215
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.094e-22 Identity = 66/156 (42.31%), Postives = 87/156 (55.77%), Query Frame = -3 Query: 132 RFRKAQCPIVERLTNSLMMHGR-----------NNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 566 RF KA+ PI+ERL LM G GKK A +I+ EII T QNP++V V A+ N+ PRE+ T I G +AVD SP RRV+ AI + GA + + +I E LA+E+INA S SYAIK+K EIE+ A++ R Sbjct: 43 RFGKAKIPIIERLAGRLMTSGHLGKKHKWTSEHQTGKKYNAYKIIIRTFEIIEKRTKQNPLKVFVKAIENAAPREETTTIEYGGARYPKAVDCSPQRRVDLAIRHMVWGAFHGSRKKPISIEEALAEEIINAYNNSLKSYAIKRKLEIEKTAESAR 198
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_AZOC5 (30S ribosomal protein S7 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsG PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = -3 Query: 132 IVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 542 IV R NS+M +GKK +A IV A++++ NP+ + V A+ N P + G + V++ RR AI L AR RN KT+ E L+ EL++AA N A+KK+++ R+A+ANR Sbjct: 22 IVSRFMNSIM----RDGKKSVAESIVYGALDVVEAKAKSNPLDLFVTALENVAPAVEVRSRRVGGATYQVPVEVRTERRQTLAIRWLIASARA---RNEKTMVERLSAELLDAANNRGN--AVKKREDTHRMAEANR 149
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METPP (30S ribosomal protein S7 OS=Methylibium petroleiphilum (strain PM1) GN=rpsG PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11 Identity = 40/122 (32.79%), Postives = 74/122 (60.66%), Query Frame = -3 Query: 132 NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 497 +GKK +A RI+ A+E + +++P++V + A+ N P + G + V++ P+RR+ A+ L AR+ R+ K++A+ LA+EL+ A++G A+KK+DE+ R+A+AN+ Sbjct: 33 SGKKAVAERIIYGALETVEKKANRDPLEVFITALNNVKPMVEVKSRRVGGANYQVPVEVRPVRRMALAMRWLKESARK---RSEKSMAQRLANELLEASEGRGG--AMKKRDEVHRMAEANK 149
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_RHOPB (30S ribosomal protein S7 OS=Rhodopseudomonas palustris (strain BisB18) GN=rpsG PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = -3 Query: 132 IVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 542 I+ + NS+M G KK +A IV A+EII T Q P+ V A+ N P + G + V++ +RR I L + AR+ RN KT+ E L+ EL++A+ G N A+KK++++ R+A+ANR Sbjct: 22 ILTKFMNSVMYAG----KKSVAEGIVYGALEIIEAKTKQGPLPVFEQALENVMPTIEVRSRRVGGATYQVPVEVRSVRRQALGIRWLISAARD---RNEKTMTERLSAELLDASNGRGN--AVKKREDVHRMAEANR 149 The following BLAST results are available for this feature:
BLAST of DN618325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618325 ID=DN618325; Name=DN618325; organism=Citrus sinensis; type=EST; length=571bpback to top |