CX046559

Overview
NameCX046559
Unique NameCX046559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046559 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.211e-33
Identity = 75/205 (36.59%), Postives = 127/205 (61.95%), Query Frame = -3
Query:  225 EPQCLKEIRELTDKHPWSVMMTSPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDAELDEHILYLRDFVQELNKALAVDPRIEICQLSIADGVTLCRRI 839
            + + ++  +E  ++H   +M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ ++ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++ GG+I  DN L  G  VA P+A ++ +++ +R     LN  +  D R+    L IADG+TL  +I
Sbjct:   34 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRVTKTMLPIADGITLVTKI 229          
BLAST of CX046559 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 77/206 (37.38%), Postives = 120/206 (58.25%), Query Frame = -3
Query:  225 REPQCLKEIRELTDKHPWSVMMTSPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDAELDEHILYLRDFVQELNKALAVDPRIEICQLSIADGVTLCRRI 842
            RE   L+ +R LT + P    M + ++AQ L+ L +LI AK  +++G FTGYS LA ALA+P DG+++  ++  +  E G P+ ++A   HKID R  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GG++     LW G V+  P  ++        + V+ LN+ +  D R+ I  L + DG+TL  +I
Sbjct:   64 REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGE-AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDV------AAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 262          
BLAST of CX046559 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.166e-29
Identity = 78/207 (37.68%), Postives = 120/207 (57.97%), Query Frame = -3
Query:  225 REPQCLKEIRELTDKHPWSVMMTSPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVV-AQPDAELDEHILYLRDFVQELNKALAVDPRIEICQLSIADGVTLCRRI 842
            RE   L+ +R LT + P    M + ++AQ L+ L +LI AK  +++G FTGYS LA ALA+P+ G+++  ++  E  + G P+ ++A V  KID R  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GGV+     LW G V+  QP  +  E        V+ LN+ +  D R+ I  L + DG++L  +I
Sbjct:   64 REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPEAGRVVTCEVDAEPPKLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGE-AGTFDIAVVDADKENCTAYYERCLQLLRPGGVLAVLRVLWRGEVLQPQPRNKTVE-------CVRNLNERILRDARVYISLLPLDDGLSLAFKI 262          
The following BLAST results are available for this feature:
BLAST of CX046559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT1_DICDI6.211e-3336.59Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]
CMTD1_HUMAN8.969e-3237.38Catechol-O-methyltransferase domain-containing pro... [more]
CMTD1_MOUSE4.166e-2937.68Catechol-O-methyltransferase domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_8G09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-8G09-M18-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046559 ID=CX046559; Name=CX046559; organism=Citrus sinensis; type=EST; length=844bp
CTTTTTTTTTTTTTACATTAAAATGTTAATTATTTTATTAAGTGGCCTTG
ACAATAAAATATAACATTTATTTTTTAAAAAGTTATTAACTTAAGAAAGA
CAATAATACATTTTTCCAAACACTCATAAGTCTAATTTATTTGTGGATTC
TACGGTCATAACCACACATAGTTTAAAAGTTACGACACAACCAGCCTCAT
GAGTGAAAATTGAGAGGATCAGCCAATGCGGCGACATAATGTAACCCCAT
CAGCAATGGAGAGCTGGCAAATCTCAATCCTTGGATCAACGGCCAGGGCC
TTGTTGAGTTCCTGCACAAAATCCCTCAAGTATAAGATATGCTCATCCAG
TTCGGCATCAGGTTGTGCCACCACGGATCCACCCCACAAGGTGTTGTCGT
AGCCAATCACTCCCCCAACCTTCACAAGCTCAATAAGCCTCTTGTGGTAA
TTAATGTAGTTATTCTTGTCAGCATCAACAAAGACGAAGTCGAATGTCCC
ATGATATTTTTCGTCTTGGATCAATTGATCAAGAAGAGGAAGAGCAGGGC
CTTCTCTGAAGTCAATCTTGTGAGCAACACCAGCTTTTTGAATTATAGGG
AGACCCTTCTCGTAGTGTTCCTTGGTGATGTCCAGGGCCAGTATCTTGCC
ATCGTCGGGAATGGCAAGGGCAGTGGCTAAGAGAGAGTAACCAGTGAAAA
CGCCAATTTCCATGGTATTCTTGGCATTGATAAGCTTGAGTAGCATGCTC
AAAAATTGTGCTTCATCAGGTGAAGTCATCATGACGCTCCATGGATGCTT
GTCCGTCAACTCGCGGATCTCCTTCAAGCATTGTGGTTCTCTTG
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