DN618262

Overview
NameDN618262
Unique NameDN618262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_COXBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metE PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.416e-40
Identity = 95/208 (45.67%), Postives = 128/208 (61.54%), Query Frame = 1
Query:    7 RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVV 624
            R    L+ + S  PA K L  G++DGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+
Sbjct:  267 RAPDQLDSVLSQLPAEKILSVGIIDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVI 473          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.416e-40
Identity = 95/208 (45.67%), Postives = 128/208 (61.54%), Query Frame = 1
Query:    7 RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVV 624
            R    L+ + S  PA K L  G++DGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+
Sbjct:  267 RAPDQLDSVLSQLPAEKILSVGIIDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVI 473          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.416e-40
Identity = 95/208 (45.67%), Postives = 128/208 (61.54%), Query Frame = 1
Query:    7 RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALA-GQKDEGF-FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVV 624
            R    L+ + S  PA K L  G++DGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD E+KSW AFA QKV E   L + L  G++  G     N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP+ PTTTIGSFPQT ++R +RR+YK  KI +  Y   I++EI +V+
Sbjct:  267 RAPDQLDSVLSQLPAEKILSVGIIDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVI 473          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.029e-40
Identity = 91/211 (43.13%), Postives = 131/211 (62.09%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LV   + L  +   FP+ K L AG+VDGRNIW NDL ASL+ L  L   +  D+L ++ SCSLLH+ +DL  E+ LD+E+KSWLAFA QK+ EV  L +AL   +D      + +AAAQASR+ S R+    ++     +     RR      R   Q+++L LP+ PTTTIGSFPQT ++R+ RR++KA +I+E EY   ++ EI + ++
Sbjct:  266 LVSAPEQLAKVLDEFPSYKILSAGLVDGRNIWRNDLEASLAQLEALRERLD-DRLWIAPSCSLLHSPMDLALESALDEELKSWLAFAVQKIEEVATLKRALVEGRDVVAQALADSAAAQASRRQSERIYRPEIRARMTEVNEDMTRRRHKYPVRAQVQREELKLPLYPTTTIGSFPQTPDIRKARRDFKAGRIAEPEYRRQMEAEIARAIQ 475          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 97/212 (45.75%), Postives = 126/212 (59.43%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANA---AAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVR       I    PA K L  GVV+GRN+W  DL  +L VLR     +G D+L V+ SCSLLH+ VDL  E+KLDDE+KSWLAFA QK  EV  LAKA+   +     +  A   A Q  R +SPR+    VQ   AA+K +D +RAT    R+  Q+  L+LP  PTTTIGSFPQT  +R  R+ +K  K++E +YV ++  EI   V+
Sbjct:  268 LVRAPDQYPTILDRLPAYKVLSLGVVNGRNVWRCDLEKALEVLRHAHERLG-DRLWVAPSCSLLHSPVDLAREDKLDDELKSWLAFAVQKCQEVALLAKAINQPEAADVVTVLAQSRAVQHRRATSPRIHKPAVQARVAAIKPADSQRATAFEQRIAKQRAGLDLPAFPTTTIGSFPQTSAIRLARQSFKQGKLTEADYVEAMHSEIRHAVE 478          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_RALPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia pickettii (strain 12J) GN=metE PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.566e-39
Identity = 95/195 (48.72%), Postives = 121/195 (62.05%), Query Frame = 1
Query:   49 AGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            A K L  GVVDGRNIW  DL   L+ L  L   +G D+L ++ SCSLLH  VDL  E KLDDE+K WLAFA QK+ E+  + +AL       +G    N  A ASR  S RV N  V+K  AA++ +D  RA    AR DAQQ +LNLP+LPTTTIGSFPQT E+RR R ++K   +   +Y+  ++ EI  VV+
Sbjct:  281 ADKVLSVGVVDGRNIWRTDLTRVLAHLTPLAQALG-DRLWIAPSCSLLHVPVDLSAETKLDDELKGWLAFARQKLDELAVIKRALVEGPAAVQGELDDNRIAIASRTQSRRVHNAGVKKRVAAIRAADAVRAAPYPARADAQQARLNLPLLPTTTIGSFPQTPEIRRARAQHKRGDLPALDYLQRMRTEIADVVR 474          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.566e-39
Identity = 91/196 (46.43%), Postives = 125/196 (63.78%), Query Frame = 1
Query:   46 PAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            PA + L  G ++GRNIW  DL A+L  L  L   +G ++L ++ SCSLLH  VDL +E KLD EI+SWLAFA QK+ E+N LA AL   +D+     +ANAAA  SR+ SPRV N  V+ A A +      RA+  + R   Q  +LNLP  PTTTIGSFPQT ++R+ RR++K+  + E  Y A+++ EI + V+
Sbjct:  285 PADRVLSVGAINGRNIWKTDLNATLDWLEPLAKQLG-ERLWIAPSCSLLHVPVDLASEQKLDPEIRSWLAFALQKLDELNVLATALNEGRDKVADALAANAAAIDSRRRSPRVNNPAVKAALARIDAQLGNRASPYTQRAPKQSARLNLPAFPTTTIGSFPQTADIRQARRQFKSGALDEAGYRAAMQAEIERSVR 479          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.015e-38
Identity = 91/196 (46.43%), Postives = 122/196 (62.24%), Query Frame = 1
Query:   46 PAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            PA + L  G ++GRNIW  DL A+L  L  L   +G D+L ++ SCSLLH  VDL +E KLD EI+SWLAFA QK+ E+  LA AL   +D+     +ANAAA  SR+ SPRV N  V+ A A +      RA+  + R   Q  +LNLP  PTTTIGSFPQT ++R  R ++KA  + E  Y A+++ EI + V+
Sbjct:  285 PADRVLSVGAINGRNIWKTDLNATLDWLEPLAKQLG-DRLWIAPSCSLLHVPVDLASEEKLDAEIRSWLAFALQKLDELKVLATALNQGRDKVADALAANAAAIDSRRRSPRVNNPAVKAALARIDAQLGNRASPYTQRAPKQSARLNLPAFPTTTIGSFPQTADIRHARSQFKAGALDEAGYRAAMQAEIERSVR 479          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.015e-38
Identity = 90/212 (42.45%), Postives = 132/212 (62.26%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQA---SRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            L+R    L+ + +G   G+ L AG++DGRNIW  DL A+L+ L     ++G ++L ++ SCSLLH  VDL NE  LD E++SWL+FAAQK+ E+  L +ALA  +  G   A AA +A   +R+ S R+ N  V +  A        RA   + R+  QQ+ L LP  PTTTIGSFPQT E+R +RR++K+  +S+  Y A+I++EI  V++
Sbjct:  272 LIRAPGQLQDVAAGLRPGQVLSAGIIDGRNIWRTDLDAALAALAPARQLLG-ERLWLAPSCSLLHVPVDLANETDLDAELRSWLSFAAQKLDELGLLGRALADARAPGVDEALAAQRAALRARRQSARIHNPAVGRRMAESNAVTRERAP-FAERIARQQQLLKLPAFPTTTIGSFPQTAEIRALRRDWKSGALSDSAYEAAIRKEIESVIR 481          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.731e-38
Identity = 91/212 (42.92%), Postives = 134/212 (63.21%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF---FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVR  + L+ +     A + L AGV++GRN+W  DL  +L  L  +   +G D+L ++ SCSLLH  VDL+ E +LD E+KSWL+FA+QK+ E++ L +AL G   +      +A  AA A+R+SSPR+ N  V +  AA +     RA   + R+  QQ +LNLP  PTTTIGSFPQT E+R +RR++K+  +S+  Y A I++EI  V++
Sbjct:  272 LVRAPEQLDDVVEALHADQVLSAGVINGRNVWRTDLDQALRKLEPVARQLG-DRLWLAPSCSLLHVPVDLLAETELDAELKSWLSFASQKLDELSLLGRALDGDSSQAVQEGLAAQRAALAARRSSPRIHNPAVGRRMAASEQVSRDRAP-FAERIRQQQARLNLPPFPTTTIGSFPQTAEIRGLRRDWKSGALSDSTYEALIRKEIEAVIR 481          
The following BLAST results are available for this feature:
BLAST of DN618262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_COXBR1.416e-4045.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN1.416e-4045.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB11.416e-4045.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITOC7.029e-4043.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE49.181e-4045.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALPJ1.566e-3948.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA41.566e-3946.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM1.015e-3846.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPD1.015e-3842.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA11.731e-3842.925-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02F07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618262 ID=DN618262; Name=DN618262; organism=Citrus sinensis; type=EST; length=628bp
TTGGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGC
TGGCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCA
ATGATCTTGCTGCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTT
GGCAAAGACAAGCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGC
TGTTGATCTTGTTAATGAGAACAAACTCGACGATGAAATCAAGTCATGGC
TGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCT
TTGGCTGGCCAAAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCA
GGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAATGAGAGAGTTCAAAAGG
CTGCTGCTGCTTTGAAGGGATCAGACCACAGACGTGCTACAAACGTTAGT
GCTAGATTGGATGCTCAACAGAAGAAGCTCAATCTTCCAATCCTCCCAAC
CACCACAATTGGATCCTTCCCACAAACCATTGAACTTAGGAGAGTCCGCC
GTGAATACAAGGCTAAGAAGATTTCTGAGGAAGAATATGTTGCTTCCATC
AAGGAGGAAATCAACAAGGTTGTCAAAC
back to top