DN618252

Overview
NameDN618252
Unique NameDN618252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.601e-14
Identity = 38/137 (27.74%), Postives = 68/137 (49.64%), Query Frame = 1
Query:  121 RIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +I G   +G+ YG+ ANN               I ++++Y  D  +  A + SN++ I+G+ N+ LE + +   A  W+Q  ++ H P  +   I +GN+V    + +   +LL AM+ VY  L   GL   + V++
Sbjct:    5 QIIGAQSIGVCYGKAANNLPSDQDVINLYNANGIRKLRIYYPDKNIFKALNGSNIEIILGVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNKVSPTNNDQYSEFLLQAMKNVYNALAAAGLQDMIKVST 141          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.703e-14
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXN-ISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGK----AQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGL 507
            +G+NYG  A+N                I RVKL+D +P  +SAF+ + +   + L N  L  + D       A+SWI+  L P++P T +T +L GNE+    DT L   LLPAM+ + + L   GL
Sbjct:   26 IGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGL 152          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.048e-13
Identity = 43/132 (32.58%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENM-TDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYS-YLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +G+ YG + NN              NI R++LYD +   L A  NS ++ I+G+ N  L+ + T+   A+ W+Q+ +    P  +I  I VGNEV     +  Y+ Y+LPA+Q VY+ +   GL  Q+ V++
Sbjct:    2 IGVCYGMMGNNLPSANEVINLYRSNNIRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWYAQYVLPAVQNVYQAVRAQGLHDQIKVST 133          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.048e-13
Identity = 40/132 (30.30%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEV--FKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            VG+ YG   NN              NI+R+++YD +  VL A   SN++ I+G+ N  L+++T+P  A+SW+Q+ ++          I VGNE+         L  ++LPAM+ ++  +   GL  Q+ V++
Sbjct:   38 VGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNRAVLEALRGSNIELILGVPNSDLQSLTNPSNAKSWVQKNVRGFWSSVLFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVST 169          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.368e-13
Identity = 37/130 (28.46%), Postives = 66/130 (50.77%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +G+ YG+IANN               I ++++Y  D  +  A + SN++ I+ + N+ LE + +   A  W+Q  ++ H P  +   I +GNEV    + +   +LL AM+ VY  L   GL  ++ V++
Sbjct:   36 IGVCYGEIANNLPSEQDVINLYKANGIRKMRIYYPDTNIFKALNGSNIEIILEVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNEVSPTNNGQYSQFLLHAMKNVYNALAAAGLQDKIKVST 165          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.048e-13
Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 1
Query:  112 SVPRIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGK-AQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTK-LYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            S   I G   +G+ YG + NN              NI R++LYD +   L A   SN++ ++GL N  ++++    + A+ W+Q+ ++   P  +I  I VGNE+     T  L S+L PAM  +YK + + GL   + V++
Sbjct:   25 STIEIAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVST 166          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13
Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  124 IQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGK-AQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTK-LYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            I G   +G+ YG + NN              NI R++LYD +   L A   SN++ ++GL N  ++++    + A+ W+Q+ ++   P  +I  I VGNE+     T  L S+L PAM  +YK + + GL   + V++
Sbjct:   29 IAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVST 166          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13
Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  124 IQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGK-AQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTK-LYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            I G   +G+ YG + NN              NI R++LYD +   L A   SN++ ++GL N  ++++    + A+ W+Q+ ++   P  +I  I VGNE+     T  L S+L PAM  +YK + + GL   + V++
Sbjct:   30 IAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVST 167          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13
Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  124 IQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGK-AQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTK-LYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            I G   +G+ YG + NN              NI R++LYD +   L A   SN++ ++GL N  ++++    + A+ W+Q+ ++   P  +I  I VGNE+     T  L S+L PAM  +YK + + GL   + V++
Sbjct:   29 IAGAESIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVST 166          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12
Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGN-EYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +GI YG+ A+N              NI  V++YD +  VL AF+N+ ++ +IG+ N + L          +W+   + P+ P T+IT I VG EV +  D      +LPAM+ ++  L   GLDK++ ++S
Sbjct:   27 IGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNAT-GLVLPAMRNIHTALKKSGLDKKIKISS 156          
The following BLAST results are available for this feature:
BLAST of DN618252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
E13K_TOBAC3.601e-1427.74Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13B_WHEAT4.703e-1434.65Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E13B_PHAVU1.048e-1332.58Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13B_HEVBR1.048e-1330.30Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13D_TOBAC1.368e-1328.46Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13F_TOBAC3.048e-1330.28Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13E_TOBAC3.981e-1330.43Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC3.981e-1330.43Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_NICPL3.981e-1330.43Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E1312_ARATH1.158e-1232.06Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02F02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618252 ID=DN618252; Name=DN618252; organism=Citrus sinensis; type=EST; length=531bp
GCAANTTTGCTTCGCTTGGCTGCCAAAATCATCAGATCAATAATGGGCAG
CTTCAGCTTCAGCTTCAGTTCCATCGTTAAACTCTCTCTCTTCTTTCTCA
TTCTTTCAGATTCAGTACCCAGAATCCAAGGCCTTCCAGGAGTTGGAATT
AACTATGGCCAGATAGCAAACAATCTGCCATCCCCATCCCGTGTCTCGGT
CCTCTTAAGATCTCTCAACATCAGCAGAGTTAAACTCTACGACACAGATC
CCGTCGTCCTCTCGGCATTCTCCAACAGTAACGTAGACTTCATCATTGGC
CTAGGCAACGAGTACCTCGAAAACATGACTGATCCGGGCAAGGCACAGAG
TTGGATCCAACAGCGGCTTCAGCCCCATCTCCCTCAGACAAGAATCACTT
GCATACTAGTAGGCAATGAAGTGTTCAAAGGTGAGGACACCAAGCTATAC
TCGTATCTCCTCCCAGCTATGCAAACGGTGTATAAAACGCTCGTTGATCT
TGGCCTTGATAAGCAAGTTATTGTCACATCC
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