DN618246

Overview
NameDN618246
Unique NameDN618246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN618246 vs. ExPASy Swiss-Prot
Match: ACP_ANADF (Acyl carrier protein OS=Anaeromyxobacter sp. (strain Fw109-5) GN=acpP PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 3 
Query:  162 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 386
            + V  +V +++ +   V   ++ + + F  DLG DSLD VE+VMA+EEEF  EIPD EA+ I T+  AV++I +H
Sbjct:    4 ANVEQKVKNIIADQLGVGEDEIKITSSFIEDLGADSLDIVELVMAMEEEFEVEIPDEEAENIKTVQDAVNYITTH 78
[Close]
BLAST of DN618246 vs. ExPASy Swiss-Prot
Match: ACP_AKKM8 (Acyl carrier protein OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=acpP PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 3 
Query:  153 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFI 377
            +  + + ++V S++ +   V+  KVT +A F  DLG DSLDTVE+VMA EE F  E+PD EA+K+ ++   V +I
Sbjct:    1 MSDNSIEEKVRSIIVDQLGVESDKVTADAKFIEDLGADSLDTVELVMAFEENFDIEVPDEEAEKLQSVADVVAYI 75
The following BLAST results are available for this feature:
BLAST of DN618246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 402
Match NameE-valueIdentityDescription
ACP_ANADF7.879e-1142.67Acyl carrier protein OS=Anaeromyxobacter sp. (stra... [more]
ACP_AKKM87.879e-1142.67Acyl carrier protein OS=Akkermansia muciniphila (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618246 ID=DN618246; Name=DN618246; organism=Citrus sinensis; type=EST; length=591bp
GGCAGCAGATACTGAAAATGGCGGCGGCGAGAGGTGCCTTGCTAAAGTAC
CTGAGAGTGAACGTGGCCACCGTGCAACGAAACCCTAGCCCCTTTTCTCT
CTCATTCAACTCCATACGCCGCTGTTTCGCGGAAGAGGTCAGGGGCTCTT
TCCTCGACAAATCTGAAGTCACCGATCGCGTCATTTCCGTCGTTAAAAAC
TTCCAGAAAGTTGATCCTTCCAAGGTTACGGTTAATGCCCATTTCCAGAA
TGATCTTGGGTTGGATAGTTTGGACACTGTGGAGGTCGTGATGGCACTTG
AAGAAGAATTCGGATTCGAGATCCCAGATAATGAGGCAGACAAGATCAAT
ACCATCAATATGGCTGTCGATTTCATTGCTTCTCATCCTCAGGCTAAGTA
GGGGAAACTATGAAGCCCTACGATGCTATTTTCACTCTTTTGATGTTCAG
AATTAGCAGCAGCATTAGAATTCTCTTATCCCGGTACCTAANATTTTTGT
TCCTTAAAAAACGAGTAAACTTTAAAAGCCTTTCTGGTTTTCCGACCCCA
TTTGAACTCTGCTTGAAGAGTATTGTTTTTGGGAGACTTGC
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