DN618245

Overview
NameDN618245
Unique NameDN618245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20
Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = -2
Query:  336 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF----HHVNEDPAEPE 611
            FG+++LKQ+VVA+ EI++  VD   E L+LASDGLWDVV NE+AVA+ +   + E AA+KL + A  RGSADNITC+VVRF    +H+ E P   +
Sbjct:  230 FGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQAAKKLLQEASQRGSADNITCLVVRFLEQENHLPERPTNDQ 325          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19
Identity = 45/81 (55.56%), Postives = 64/81 (79.01%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG+++LKQ+VVA+ EI++  VD   E L+LASDGLWDVV N++AV + R  ++PE AA++L + A+ RGSADNIT ++VRF
Sbjct:  248 FGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPIQDPEQAAKRLLQEAYQRGSADNITVVIVRF 328          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.515e-18
Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG++ LK +V+AE EIQ+ ++    E +V+ASDGLW+V+ N+DAVA+ R   + E AARKL +  + RGS DNITCIVVRF
Sbjct:  289 FGDKQLKPYVIAEPEIQEEDIST-LEFIVVASDGLWNVLSNKDAVAIVRDISDAETAARKLVQEGYARGSCDNITCIVVRF 368          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.831e-14
Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG+R LK  + +E +I+  ++D   ELLVLASDGLW V+ N++ V +A+  ++P+ AA++LT  A  R S D+I+C+VVRF
Sbjct:  202 FGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKRFKDPQAAAKQLTAEALKRDSKDDISCVVVRF 282          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 36/81 (44.44%), Postives = 59/81 (72.84%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG++ LK  + +E +I++  VD   ++L+LASDG+W V+ NE+A+ +AR  ++P+ AA++LT  A  R S D+I+C+VVRF
Sbjct:  200 FGDKGLKTHLSSEPDIKEATVDSQTDVLLLASDGIWKVMTNEEAMEIARRVKDPQKAAKELTAEALRRESKDDISCVVVRF 280          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.406e-13
Identity = 33/81 (40.74%), Postives = 58/81 (71.60%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG++ LK  + +E +++ + ++   E ++LASDGLW V+ N++AV L ++ ++P+ AA++LT  A  R S D+I+CIV+RF
Sbjct:  239 FGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKVMKNQEAVDLVKSIKDPQAAAKRLTTEALARKSKDDISCIVIRF 319          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.090e-13
Identity = 35/80 (43.75%), Postives = 58/80 (72.50%), Query Frame = -2
Query:  372 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVR 611
            FG++ LK  + ++ +++D  +D+  ++LVLASDGLW V+ N++A+ +AR  ++P  AA++LT  A  R S D+I+CIVVR
Sbjct:  201 FGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQEAIDIARRIKDPLKAAKELTTEALRRDSKDDISCIVVR 280          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.112e-13
Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG+R LK+ + +E ++ +  +DE  + L+LASDGLW V+ N++AV   +  ++ + AA+ LTE A  R S D+I+CIVV+F
Sbjct:  208 FGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWKVMSNQEAVDEIKDFKDAQAAAKHLTEQAVNRKSKDDISCIVVKF 288          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.554e-12
Identity = 35/81 (43.21%), Postives = 58/81 (71.60%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG++ LK ++ +E EI+D+ +D   + L+LASDG+  V+ N++AV +A+  ++P+ AAR++   A  R S D+I+CIVVRF
Sbjct:  202 FGDKNLKAYLNSEPEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAKKLKDPKEAARQVVAEALKRNSKDDISCIVVRF 282          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.462e-12
Identity = 33/82 (40.24%), Postives = 55/82 (67.07%), Query Frame = -2
Query:  366 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFH 611
            FG++ LK  + +E +I    +D+  E ++ ASDG+W V+ N++AV   ++ ++P  AA+ L E A +R S D+I+CIVV+FH
Sbjct:  202 FGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVLSNQEAVDAIKSIKDPHAAAKHLIEEAISRKSKDDISCIVVKFH 283          
The following BLAST results are available for this feature:
BLAST of DN618245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
P2C59_ORYSJ1.551e-2053.13Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C10_ORYSJ1.005e-1955.56Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C11_ARATH5.515e-1854.32Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C41_ORYSJ4.831e-1446.91Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C09_ARATH1.076e-1344.44Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C44_ORYSJ1.406e-1340.74Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C10_ARATH4.090e-1343.75Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C62_ORYSJ9.112e-1343.21Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C17_ARATH1.554e-1243.21Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C58_ARATH3.462e-1240.24Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02E22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618245 ID=DN618245; Name=DN618245; organism=Citrus sinensis; type=EST; length=612bp
TTTTTAAACTACGAAAACCTTTGAGTTTTTATTAACTTAAGACCGAAATA
CCCAGAACGGGCATTTAGACATACAGATTTACAGGCCACATTATGGAGCG
AAGAGGAATAGTTATTCTGGAATGAACCAAGACTCAATATATGCAGTCAA
TACAGAAAGGTTCAAATTAGGGGGGTGCGGGGAAAAAAAAGAAACAATGA
ATAAAAAAATCGCCTTCCTCCCTGTTGCTATGCACATTCAGCCATGCATG
TGCAGATTTCCAGATGATCTACAGCCTAAAGGGTCGATAAACCTACACCA
TGCAACATAAATGAAGATTCCTACTCCTGCTCCACTTCAGGTTCGGCTGG
ATCTTCATTGACGTGGTGGAATCTCACTACAATGCACGTTATGTTGTCAG
CACTGCCTCGGGTAAAAGCAGTCTCCGTTAACTTCCGAGCTGCGATTTCA
GGTTCTTCCCCTGTTCGGGCAAGTGCAACAGCATCCTCATTGGGTACTAC
ATCCCATAGTCCATCACTTGCAAGCACAAGCAGCTCAAATCCTTCATCTA
CTTCAAGGTCCTGGATCTCANGTTCCGCAACGACAAATTGCTTCAGCATG
CGGTTACCAAAA
back to top