DN618245

Overview
NameDN618245
Unique NameDN618245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = -2
Query:  363 GNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR---TGEEPEI---AARKLTETAFTRGSADNITCIVVRFHH 608
            G+R LK++V+AE E + L +   FE L+LASDGLWD V N++AV + R    G E  +   A +KL E +  RGS D+I+ I+++  +
Sbjct:  300 GDRYLKEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVVRPYCVGVENPMTLSACKKLAELSVKRGSLDDISLIIIQLQN 387          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 34/90 (37.78%), Postives = 58/90 (64.44%), Query Frame = -2
Query:  360 GNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR-------TGEEPEIAARKLTETAFTRGSADNITCIVVRFHHV 608
            G+  LKQ++++E EI  L ++   E L+LASDGLWD V N++AV +AR          +P +A +KL + + +RGS D+I+ ++++  H+
Sbjct:  290 GDAHLKQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIARPFCKGTDQKRKPLLACKKLVDLSVSRGSLDDISVMLIQLCHL 379          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = -2
Query:  372 GNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR------TGEEPEIAARKLTETAFTRGSADNITCIVVR 608
            G+  LKQ+VV++ +   L VD   E L+LASDGLWD V N++AV +AR             A R+L ETA TRGS D+I+ ++++
Sbjct:  301 GDAHLKQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQEAVDIARPLYISNDKASRMTACRRLVETAVTRGSTDDISIVIIQ 385          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 31/81 (38.27%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG++ LK  + ++ +I+D  +D   E ++ ASDG+W V+ N++AV L ++ ++P+ AA++L E A ++ S D+I+CIV  F
Sbjct:  198 FGDKSLKIHLSSDPDIRDENIDHETEFILFASDGVWKVMSNQEAVDLIKSIKDPQAAAKELIEEAVSKQSTDDISCIVPCF 278          
The following BLAST results are available for this feature:
BLAST of DN618245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
P2C30_ARATH3.828e-1142.05Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C02_ARATH3.828e-1137.78Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C32_ORYSJ5.000e-1143.53Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C20_ARATH6.530e-1138.27Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618245 ID=DN618245; Name=DN618245; organism=Citrus sinensis; type=EST; length=612bp
TTTTTAAACTACGAAAACCTTTGAGTTTTTATTAACTTAAGACCGAAATA
CCCAGAACGGGCATTTAGACATACAGATTTACAGGCCACATTATGGAGCG
AAGAGGAATAGTTATTCTGGAATGAACCAAGACTCAATATATGCAGTCAA
TACAGAAAGGTTCAAATTAGGGGGGTGCGGGGAAAAAAAAGAAACAATGA
ATAAAAAAATCGCCTTCCTCCCTGTTGCTATGCACATTCAGCCATGCATG
TGCAGATTTCCAGATGATCTACAGCCTAAAGGGTCGATAAACCTACACCA
TGCAACATAAATGAAGATTCCTACTCCTGCTCCACTTCAGGTTCGGCTGG
ATCTTCATTGACGTGGTGGAATCTCACTACAATGCACGTTATGTTGTCAG
CACTGCCTCGGGTAAAAGCAGTCTCCGTTAACTTCCGAGCTGCGATTTCA
GGTTCTTCCCCTGTTCGGGCAAGTGCAACAGCATCCTCATTGGGTACTAC
ATCCCATAGTCCATCACTTGCAAGCACAAGCAGCTCAAATCCTTCATCTA
CTTCAAGGTCCTGGATCTCANGTTCCGCAACGACAAATTGCTTCAGCATG
CGGTTACCAAAA
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