DN618244

Overview
NameDN618244
Unique NameDN618244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 8.674e-36
Identity = 74/91 (81.32%), Postives = 79/91 (86.81%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQP FDKKQFVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEVKC
Sbjct:   80 EQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.133e-35
Identity = 70/91 (76.92%), Postives = 81/91 (89.01%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQP+FDKKQFV YMK++IK LTPKL  E++E+FK NI+GATK+LLSKLSDLQFFVGESM DD  +VFAYYK+GATDPTFLY+A  LKEVKC
Sbjct:   78 EQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 7.343e-35
Identity = 68/91 (74.73%), Postives = 77/91 (84.62%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEVKC
Sbjct:   78 EQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 2.136e-34
Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQPAFDKKQF+ Y+KR+IK LT KL  E  + FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYY+EGA DPTFLY A  LKEVKC
Sbjct:   78 EQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.644e-34
Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQP +DKK F+ Y+K++IKLLTPKL+ E+QE FKK IEGATKFLL KL D QFFVGE MHDD  +VFAYYKEGAT+PTFLY A  LKEVKC
Sbjct:   78 EQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 6.216e-34
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQPAFDKKQF+++MKR+IK L+ KL  +  ++FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYYKEGA DPTFLY A  LKEVKC
Sbjct:   78 EQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.444e-30
Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQP+ DKK F++ +K++IK LTP L  E+QE FK  IEGA K+LL K+ DLQFFVGESM DD  +VFAYYKEGATDPTFLYIA  LKEVKC
Sbjct:   78 EQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.703e-29
Identity = 60/91 (65.93%), Postives = 72/91 (79.12%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 273
            EQP FDKK FV+Y+K++IK LT  L  E+ + FKK +EGATKFLLSKL DLQFFVGESM DD  + FAYYK+GAT+ TFLY +  LKE+KC
Sbjct:   77 EQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP1_DICDI (Translationally-controlled tumor protein homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282853 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.760e-12
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 1
Query:    4 QPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 270
            + +FDKK +  Y+K ++K +  KL++    R + FKK+     K +L K  + +F+ GE+M  DG +   YYK G  DP FLY  D L+ VK
Sbjct:   82 ETSFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKDAADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIFLYFKDGLESVK 173          
BLAST of DN618244 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.541e-11
Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = 1
Query:    1 EQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 270
            +  +FDKK ++TY+K ++K +  KL E   +R   F+K  +   K +++   D +F++GESM+ DG +    Y+E    P F    D LKE+K
Sbjct:   74 QSTSFDKKSYLTYLKGYMKAIKSKLQESNPDRVAAFEKGAQDFAKKIVANFKDYEFYIGESMNPDGMVCLLNYREDGVTPYFTMWKDGLKEIK 166          
The following BLAST results are available for this feature:
BLAST of DN618244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TCTP_FRAAN8.674e-3681.32Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC1.133e-3576.92Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH7.343e-3574.73Translationally-controlled tumor protein homolog O... [more]
TCTP_HORVU2.136e-3474.73Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL3.644e-3473.63Translationally-controlled tumor protein homolog O... [more]
TCTP_WHEAT6.216e-3473.63Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME2.444e-3069.23Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE2.703e-2965.93Translationally-controlled tumor protein homolog O... [more]
TCTP1_DICDI1.760e-1238.04Translationally-controlled tumor protein homolog 1... [more]
TCTP_CRYNE2.541e-1134.41Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618244 ID=DN618244; Name=DN618244; organism=Citrus sinensis; type=EST; length=459bp
GAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACATGAAGAGATT
CATCAAGTTGCTGACGCCCAAACTGAGTGAGGAGAGGCAGGAGATATTTA
AGAAGAATATTGAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGAC
CTTCAATTCTTTGTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTT
TGCTTACTACAAGGAAGGTGCGACCGACCCAACATTTTTGTATATTGCTG
ATGCATTGAAGGAGGTGAAGTGCTAAGCCGGGCTTCGAAGAGGAAGTGCC
TGCTGTAGTTCTAGTTTTAATTATTGCCCGCGGTTATTTTTATGTATCTT
TTGTACTGGTTTACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTT
TGACATAGACAATATGTTTTTCTGCTCCTAATTATTGTGTTTTATGGTTT
GAGATTGAA
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