DN618243

Overview
NameDN618243
Unique NameDN618243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 7.621e-36
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQP FDKKQFVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEVKC
Sbjct:   79 QEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 9.953e-36
Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQP+FDKKQFV YMK++IK LTPKL  E++E+FK NI+GATK+LLSKLSDLQFFVGESM DD  +VFAYYK+GATDPTFLY+A  LKEVKC
Sbjct:   77 QEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 6.451e-35
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEVKC
Sbjct:   77 QEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 1.877e-34
Identity = 68/92 (73.91%), Postives = 77/92 (83.70%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQPAFDKKQF+ Y+KR+IK LT KL  E  + FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYY+EGA DPTFLY A  LKEVKC
Sbjct:   77 QEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.202e-34
Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQP +DKK F+ Y+K++IKLLTPKL+ E+QE FKK IEGATKFLL KL D QFFVGE MHDD  +VFAYYKEGAT+PTFLY A  LKEVKC
Sbjct:   77 QEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.461e-34
Identity = 67/92 (72.83%), Postives = 79/92 (85.87%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQPAFDKKQF+++MKR+IK L+ KL  +  ++FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYYKEGA DPTFLY A  LKEVKC
Sbjct:   77 QEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.148e-30
Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQP+ DKK F++ +K++IK LTP L  E+QE FK  IEGA K+LL K+ DLQFFVGESM DD  +VFAYYKEGATDPTFLYIA  LKEVKC
Sbjct:   77 QEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.374e-29
Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = -1
Query:  209 REQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 484
            +EQP FDKK FV+Y+K++IK LT  L  E+ + FKK +EGATKFLLSKL DLQFFVGESM DD  + FAYYK+GAT+ TFLY +  LKE+KC
Sbjct:   76 QEQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP1_DICDI (Translationally-controlled tumor protein homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282853 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.019e-12
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = -1
Query:  212 QPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 478
            + +FDKK +  Y+K ++K +  KL++    R + FKK+     K +L K  + +F+ GE+M  DG +   YYK G  DP FLY  D L+ VK
Sbjct:   82 ETSFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKDAADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIFLYFKDGLESVK 173          
BLAST of DN618243 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = -1
Query:  212 EQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 481
            +  +FDKK ++TY+K ++K +  KL E   +R   F+K  +   K +++   D +F++GESM+ DG +    Y+E    P F    D LKE+K
Sbjct:   74 QSTSFDKKSYLTYLKGYMKAIKSKLQESNPDRVAAFEKGAQDFAKKIVANFKDYEFYIGESMNPDGMVCLLNYREDGVTPYFTMWKDGLKEIK 166          
The following BLAST results are available for this feature:
BLAST of DN618243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
TCTP_FRAAN7.621e-3680.43Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC9.953e-3676.09Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH6.451e-3573.91Translationally-controlled tumor protein homolog O... [more]
TCTP_HORVU1.877e-3473.91Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL3.202e-3472.83Translationally-controlled tumor protein homolog O... [more]
TCTP_WHEAT5.461e-3472.83Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME2.148e-3068.48Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE2.374e-2965.22Translationally-controlled tumor protein homolog O... [more]
TCTP1_DICDI2.019e-1238.04Translationally-controlled tumor protein homolog 1... [more]
TCTP_CRYNE2.916e-1134.41Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618243 ID=DN618243; Name=DN618243; organism=Citrus sinensis; type=EST; length=484bp
TTTTTTTTTTTTTTTTTGTGTATTCAGTCTCAAACCATAAAACCCAATAA
TTAGGAGCAGAAAAACATATTGTTTATGTCAAAATAAAAACTAAAAAAAA
GCAAGCACAAGTCCCGAGTAAACCAGTACGAAAGATACATAAAAATAACC
GCGGGCAATAATTAAAACTAGAACTACAGCAGGCACTTCCTCTTCGAAGC
CCGGCTTAGCACTTCACCTCCTTCAATGCATCAGCAATATACAAAAATGT
TGGGTCGGTCGCACCTTCCTTGTAGTAAGCAAAGACAAGACAGCCATCAT
CATGCATGCTCTCCCCAACAAAGAATTGAAGGTCACTGAGCTTCGAGAGC
AAGAACTTGGTCGCTCCCTCAATATTCTTCTTAAATATCTCCTGCCTCTC
CTCACTCAGCTTGGGCGTCAGCAACTTGATGAATCTCTTCATGTATGTTA
CAAACTGCTTCTTGTCAAAAGCAGGTTGCTCCCT
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