DN618239

Overview
NameDN618239
Unique NameDN618239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_PETMO (Adenine phosphoribosyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=apt PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = -2
Query:  363 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 593
            Y LEYG+  +EMHV A+  GE+ ++VDD++ATGGT  A   L++R G   V   C+ EL  L  RE L +  +  L+
Sbjct:   95 YELEYGQTSLEMHVDAIDKGEKVIVVDDVLATGGTTKAIKELVDRAGGKTVGVVCLAELTYLNPRENLKDLEIASLI 171          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_NITSB (Adenine phosphoribosyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=apt PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11
Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQA-GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y+LEYG D +E+H+ A +  G+R L++DDL+ATGGT  AA +L+++ G  +VE   +I L  L G E+L
Sbjct:  101 YALEYGVDEIEIHIDAFRGEGKRVLLIDDLIATGGTAQAAAKLIQKTGQELVEACFIINLKFLNGEEKL 169          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_FRAAA (Adenine phosphoribosyltransferase OS=Frankia alni (strain ACN14a) GN=apt PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y LEYG   +E+H  AV+  ER L+VDD++ATGGT +AA  LL  VG  VV  A ++EL  L GRER+
Sbjct:  111 YDLEYGTATIEIHADAVRPDERVLLVDDVLATGGTAAAAHGLLAGVGAEVVGLAVLMELSFLPGRERV 178          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_STRGB (Adenine phosphoribosyltransferase OS=Streptomyces galbus GN=apt PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y LEYG   +E+H   + AG+R LIVDD++ATGGT  AAI+L+ R G  V   A ++EL  L GR RL
Sbjct:  100 YDLEYGSAEIEVHAEDLAAGDRVLIVDDVLATGGTAEAAIQLIRRAGAEVCGLAVLMELGFLGGRARL 167          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_SACEN (Adenine phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=apt PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 593
            Y LEYG   +E+  G ++AG+R L+VDD++ATGGTL+AA  L+   G  V     V+EL  L GR ++ +  L  L++
Sbjct:  104 YRLEYGSASLELPAGTLRAGQRVLVVDDVLATGGTLNAACELVRSAGSEVAAATVVLELTALGGRNKVPDVALHALLT 181          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_PSEST (Adenine phosphoribosyltransferase OS=Pseudomonas stutzeri GN=apt PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 34/80 (42.50%), Postives = 53/80 (66.25%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE--KPLFVLVS 593
            YS EYG+  +E+H  ++  G+  L+ DDL+ATGGTL AA +L+ R+  ++ E A +I+LPEL G ++L +   P F L +
Sbjct:   97 YSTEYGEAHLEIHADSLCEGDSVLLFDDLIATGGTLLAAAQLVRRMRANIHEAAAIIDLPELGGSQKLQDIGIPTFTLTA 176          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_PSEMY (Adenine phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=apt PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK--PLFVLVS 593
            Y  EYG+  +E+H  ++  G+  LI DDL+ATGGTL AA  L+ R+   V E A +I+LPEL G ++L +   P F L +
Sbjct:   97 YQTEYGEAFLEVHSDSLCEGDSVLIFDDLIATGGTLIAAANLVRRMRASVFEAAAIIDLPELGGSQKLQDAAIPTFTLTA 176          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_ANASK (Adenine phosphoribosyltransferase OS=Anaeromyxobacter sp. (strain K) GN=apt PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 593
            Y+LEYG+  +E+H+ A+  G+R L+VDD++ATGGT  AA RL+ R G  ++  A + EL  L G  +LG   +  L++
Sbjct:   94 YALEYGEGALELHIDAIGPGDRVLVVDDVLATGGTAGAAGRLVVRQGAELLGYAFLAELSFLNGARQLGHAKVHSLLT 171          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_ANAD2 (Adenine phosphoribosyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=apt PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 593
            Y+LEYG+  +E+H+ A+  G+R L+VDD++ATGGT  AA RL+ R G  ++  A + EL  L G  +LG   +  L++
Sbjct:   94 YALEYGEGALELHIDAIGPGDRVLVVDDVLATGGTAGAAGRLVVRQGAELLGYAFLAELSFLNGARQLGHAKVHSLLT 171          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_ACIC1 (Adenine phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=apt PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y+LEYG   +E+HV A + G+R L+VDD++ATGGT +AA+ L+++     V  + +IEL  L GR RL
Sbjct:   99 YALEYGTATIEVHVDAFRPGDRVLVVDDVLATGGTAAAALELIDQASAKAVGLSFLIELSALGGRSRL 166          
The following BLAST results are available for this feature:
BLAST of DN618239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PETMO3.578e-1142.86Adenine phosphoribosyltransferase OS=Petrotoga mob... [more]
APT_NITSB3.578e-1146.38Adenine phosphoribosyltransferase OS=Nitratiruptor... [more]
APT_FRAAA3.578e-1152.94Adenine phosphoribosyltransferase OS=Frankia alni ... [more]
APT_STRGB4.674e-1151.47Adenine phosphoribosyltransferase OS=Streptomyces ... [more]
APT_SACEN4.674e-1142.31Adenine phosphoribosyltransferase OS=Saccharopolys... [more]
APT_PSEST4.674e-1142.50Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_PSEMY4.674e-1143.75Adenine phosphoribosyltransferase OS=Pseudomonas m... [more]
APT_ANASK4.674e-1142.31Adenine phosphoribosyltransferase OS=Anaeromyxobac... [more]
APT_ANAD24.674e-1142.31Adenine phosphoribosyltransferase OS=Anaeromyxobac... [more]
APT_ACIC14.674e-1147.06Adenine phosphoribosyltransferase OS=Acidothermus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618239 ID=DN618239; Name=DN618239; organism=Citrus sinensis; type=EST; length=594bp
CCCCCTTTTTTTTTTTTTATAAAGAGACGAGTTGAATTGCGGTTTAATTC
ACACATGATACATCAACAACCATCAGATAGAATCTCCAGATAATTTGAAA
AGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTTTCATAAGCCTA
TCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTTCCCCACCACTC
TTTCCCCAACGTCTTAAATAAAATAAAAAGCCAATGAAACTGCTCTTATA
TTACCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCAGAGCCCGAGCGA
CTAGAAACCCATATGGTCCACAAACATTGCATTTAAACCATAACCTGAGG
TCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTCCCAGCCGTTCCC
GACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACACTCAACCACATGC
ACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAAGGTCCCACCAGT
TGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTGCTTGTACAGCAC
CTACATGCATCTCCATTACATCTTTTCCATATTCCAAGGAATAC
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