DN618208

Overview
NameDN618208
Unique NameDN618208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length550
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618208 vs. ExPASy Swiss-Prot
Match: CDPK4_PLABA (Calcium-dependent protein kinase 4 OS=Plasmodium berghei (strain Anka) GN=CPK4 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.929e-11
Identity = 48/198 (24.24%), Postives = 92/198 (46.46%), Query Frame = 3
Query:    3 FWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLG----ETVKARLKQFSVMNKLKKRALQVV-AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQ-------NIPEADLQI----LMEAADVDGDGSLNYGEFVAVSVHL*KMANDEHLHKA 548
            F    E  + + +      F    + K+S+ AKDL+KKML      R++A + LEH W++      NV++     E     +KQF    KL + AL  + ++  +++E   L + F+ MD N  G+++            +       ++  A +++    ++ + D+D +G + Y EF+ V++    + + E L KA
Sbjct:  270 FNGSNEYDILKKVETGKYTFDLPQFKKISDKAKDLIKKMLMYTSAVRISARDALEHEWIRLMTSKDNVNIDIPSLELSITNIKQFQSTQKLAQAALLYMGSKLTTIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGDDTTDLDNAAIEVEVDQILSSIDLDQNGYIEYSEFLTVAIDRKLLLSTERLEKA 467          
BLAST of DN618208 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAF7 (Calcium-dependent protein kinase 4 OS=Plasmodium falciparum (isolate 3D7) GN=CPK4 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11
Identity = 48/198 (24.24%), Postives = 90/198 (45.45%), Query Frame = 3
Query:    3 FWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLG----ETVKARLKQFSVMNKLKKRALQVV-AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQ-----------NIPEADLQILMEAADVDGDGSLNYGEFVAVSVHL*KMANDEHLHKA 548
            F    E  + + +      F    + K+S+ AKDL+KKML      R++A + LEH W++      N+++     E   A ++QF    KL + AL  + ++  +++E   L + F+ MD N  G+++            +              E ++  ++ + D+D +G + Y EF+ VS+    + + E L KA
Sbjct:  270 FNGSNEYDILKKVEAGKYTFDLPQFKKISDKAKDLIKKMLMYTSAVRISARDALEHEWIKMMTSKDNLNIDIPSLELSIANIRQFQSTQKLAQAALLYMGSKLTTIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGEDTSDLDNAAIEYEVDQILNSIDLDQNGYIEYSEFLTVSIDRKLLLSTERLEKA 467          
The following BLAST results are available for this feature:
BLAST of DN618208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CDPK4_PLABA3.929e-1124.24Calcium-dependent protein kinase 4 OS=Plasmodium b... [more]
CDPK4_PLAF75.131e-1124.24Calcium-dependent protein kinase 4 OS=Plasmodium f... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618208 ID=DN618208; Name=DN618208; organism=Citrus sinensis; type=EST; length=550bp
CTTTCTGGGCAGAAACTGAACAAGGGGTAGCACAGGCAATTATTCGCTCA
GTGATTGATTTTAAGAGGGACCCCTGGCCCAAAGTTTCTGAAAATGCAAA
GGACCTTGTGAAGAAGATGCTTAATCCTGACCCAAAGCAGAGGCTTACCG
CTGAGGAAGTACTAGAGCATCCTTGGTTACAAAATGCCAAAAAGGCTCCA
AATGTTTCACTGGGTGAGACCGTGAAAGCAAGGCTTAAACAGTTTTCTGT
AATGAACAAGCTTAAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGT
CTGTGGAGGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACT
AACAAGAGAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAA
AGGTGGCCAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTG
CCGATGTTGATGGTGACGGAAGTTTGAATTATGGAGAGTTTGTCGCAGTT
TCTGTTCACCTTTAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTT
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