DN618198

Overview
NameDN618198
Unique NameDN618198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618198 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.968e-18
Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 1 
Query:  151 PIRSSSQSQTHTISMSLTPQYDFN--SFTFDPIKESIVSREMTRRYMTDMVTYADTDVIVVGAGSAGLSCAYEI-SKNPSIRVAIIEQSVSPGGGAWLGGQ 444
            P++S  QS       +  P+   N     F PIKE  V R M RRY  DM   A +DVI+VGAGSAGLSCAY + +  P +++ I+E +V+PGGG WLGGQ
Sbjct:   26 PLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQ 126
The following BLAST results are available for this feature:
BLAST of DN618198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THI4_UROFA1.968e-1847.52Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618198 ID=DN618198; Name=DN618198; organism=Citrus sinensis; type=EST; length=446bp
TTCAACCCTACGCAAGTGTCCAAACAAATTAACATAATGGCAGCCATGTC
TACAACCCTCACTTCCTCACTCTCTTCAGGCCCTAAATCTTCTTTCTTAG
ACCACAAGTCATCTTTCCATGGCAGCCCAATCATCACTTCTCGTGTCACT
CCCATCAGATCCTCCTCACAATCACAAACCCACACCATTTCCATGTCCTT
GACTCCACAGTACGACTTCAACTCATTCACATTCGACCCCATCAAAGAAT
CAATCGTTTCTCGTGAAATGACCCGCCGTTACATGACTGACATGGTCACC
TACGCCGACACTGACGTCATCGTCGTCGGTGCTGGCTCCGCCGGTCTCTC
CTGCGCTTACGAGATCAGCAAGAACCCCTCAATCCGTGTCGCCATAATCG
AGCAATCAGTAAGCCCTGGTGGTGGCGCATGGCTCGGTGGCCAGCT
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