DN618197

Overview
NameDN618197
Unique NameDN618197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.229e-15
Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = -2
Query:  175 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDS-VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 555
            G R+ G+V NW    M       +DP  + A++V+   GHD        K++    + +S V G K +     E  +V  TRE+ PG+IV GM    +   PRMGP FG M++SG+KAA +AL+ L Q
Sbjct:  135 GDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHDAAVCRVVQKKIPGAIVGESGVIGEKPMWAALGEKIVVDATREVYPGLIVAGMAATTVAAGPRMGPIFGGMLLSGEKAASIALEKLAQ 259          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    A   +++  +G++  +PG ++     AE   V  T  + PG+ V GM V E+ G PRMGP FG+M++SG+K A   +K L
Sbjct:  145 RVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHDAEVVAVASRKIPELGIV--IPGERSAYSEMAEKLTVEQTGVVAPGLYVAGMSVTEVRGLPRMGPIFGSMVLSGKKVAEDIIKDL 262          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.097e-15
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            +V GV   W    M       +DP  + AK VV + GHD    +   +++  + ++  +PG K+    TAE+  V  T  + PG+   GM V E+ G PRMGP FGAM++SG++ A + +K L
Sbjct:  146 KVVGVAVEWTATQM---AGLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIV--IPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKRVAEIIIKDL 263          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.739e-15
Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE   V  + E+ PG+   GM V EI   PRMGP FGAM++SG+K A   +K L
Sbjct:  141 RVTGVAVEWTATQM---ASLHVDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGMAVTEIKAIPRMGPIFGAMLLSGKKVAEDIIKNL 258          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.359e-14
Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKS--IGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV G+V NW  V++    +  +DP ++  K+V+   GH+     T ++++ +  IG +  + G K +     E  +V  T+EI PG+IV GM       +PRMGP FG M++SG+KAA LAL+ L
Sbjct:  137 RVTGIVVNWGPVTVQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGNLGKL-GEKPMWSEVGEQLVVDATKEIYPGLIVAGMAANAATCSPRMGPVFGGMLLSGEKAAKLALEKL 257          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.775e-14
Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = -2
Query:  202 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAA 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T ++  G+  TGM V E+ G PRMGP FGAM++SG+  A
Sbjct:  143 RVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMGPIFGAMVLSGKAVA 253          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T ++  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  143 RVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T ++  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  143 RVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T ++  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  143 RVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T ++  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  143 RVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
The following BLAST results are available for this feature:
BLAST of DN618197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
THI4_METTP1.229e-1536.72Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_SULAC1.606e-1536.59Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULTO2.097e-1534.96Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METS52.739e-1536.59Putative thiazole biosynthetic enzyme OS=Metallosp... [more]
THI4_METBF1.359e-1436.80Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_SULSO1.775e-1436.21Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIY3.955e-1434.96Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIM3.955e-1434.96Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL3.955e-1434.96Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK3.955e-1434.96Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618197 ID=DN618197; Name=DN618197; organism=Citrus sinensis; type=EST; length=556bp
TTTTTTTTTTTTTTTTTGGGTTTATTGTTGATTTTGAATTCTCATCAAAA
TGTACATAATTCTCAGATTTTATAATTTTTAAGCATCAACAATCTCGCTG
TTCTCAGTGGCCGCAAGGACAAACTCTGGCTGTACTTCCGTAACTTCACT
GAATGTCCCATCTATCGCATTCGGCTGCCCCAATGCCTTCAACGCCAAAT
GGGCTGCCTTCTGCCCTGAAATCATCATGGCCCCGAATGTAGGTCCCATT
CTAGGGGCACCGTCGATCTCTGCGACTTCCATGCCCGTGACAATCATGCC
AGGCACGATCTCCCTGGTAAGCCTAACGATAGCATCCTCTGCAGTGTTCA
TATCGAGAGCTTTCATTCCGGGGACGGAGTCAATCATGCCAATACTCTTA
AGCCTCTTAACACCGGTAGCCCCAAAAGGGCCGTCATGGCCACACGAGCT
GACCACAATCTTGGCCTCCATCACATTGGGGTCCATGCAAGACTGTGTGT
CGTGATTCATAGACACCAAGGCCCAGTTTGTGACGACGCCACCTACTCTC
CCTCCC
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