DN618197

Overview
NameDN618197
Unique NameDN618197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T ++  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  143 RVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  175 GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 552
            GR+GG+V NW  V M       +DP  M     V + GHD    A   + ++  G   +V G   +    AE  I+  T+E+ PG+ VTGM    + G  RMGP FG M++SG++AA L  + LG+
Sbjct:  136 GRIGGLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHD----AMIARMVEKKGGALTVKGESFMWAERAESQILAHTKEVFPGLFVTGMAANAVAGECRMGPIFGGMLLSGERAAELVAERLGR 254          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMID-SVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV G+V NW  V+     +  +DP ++  K+V+   GHD     T ++++ +  + +  + G K +     E   V  T+EI PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct:  137 RVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13
Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKS--IGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV G+V NW  V+     +  +DP ++  K+V+   GH+     T ++++ +  IG +  + G K +     E   V  T+EI PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct:  137 RVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLL-GEKPMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV G++  W  + M+    S +DP   +AK V+ + GHD    +   +++  +G+   V G K+     +E  +V  T  + PG+ V GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:  135 RVVGLLWVWTPIQMSG---SHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYVAGMAVCTVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 42/123 (34.15%), Postives = 62/123 (50.41%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  + G K+     AE+  V  T ++  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  143 RVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IAGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.373e-13
Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = -2
Query:  181 GRVGGVVTNWA-LVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 552
            GRV GVV NW   V +       +DP  ++A  VV   GH     A  V  L   G+++       +D + AE  +V  T EI PG++V+GM V  + G PRMGP FG M++SGQK A +  + L
Sbjct:  134 GRVCGVVVNWGPTVRLGLH----VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP-MDADEAEKFVVDNTGEIFPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.373e-13
Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = -2
Query:  181 VGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD----------GPFGATGVKRLK--SIGMIDS-----------VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 546
            V G V NW  V       +C+DP  +EA +VV + GHD          G   A G++ ++  + GM  S            PG  ++ +  +ED +V  T ++  G++  G+  A + G  RMGPTFGAM++SG+ AA+  +  L
Sbjct:  146 VAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.373e-13
Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = -2
Query:  181 VGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD----------GPFGATGVKRLK--SIGMIDS-----------VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 546
            V G V NW  V       +C+DP  +EA +VV + GHD          G   A G++ ++  + GM  S            PG  ++ +  +ED +V  T ++  G++  G+  A + G  RMGPTFGAM++SG+ AA+  +  L
Sbjct:  146 VAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.711e-13
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = -2
Query:  175 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 549
            RV G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+   + G K+     +E  +V  T  + PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L +
Sbjct:  135 RVAGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGRKVAEVVAKDLAE 254          
The following BLAST results are available for this feature:
BLAST of DN618197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
THI4_SULIA3.955e-1434.96Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METMJ3.955e-1436.51Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_METMA5.165e-1437.10Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METAC1.151e-1337.60Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_PYRIL2.564e-1334.15Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_SULIN3.348e-1334.15Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_THEMA4.373e-1338.40Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_HALSA4.373e-1331.72Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS34.373e-1331.72Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_PYRCJ5.711e-1331.20Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618197 ID=DN618197; Name=DN618197; organism=Citrus sinensis; type=EST; length=556bp
TTTTTTTTTTTTTTTTTGGGTTTATTGTTGATTTTGAATTCTCATCAAAA
TGTACATAATTCTCAGATTTTATAATTTTTAAGCATCAACAATCTCGCTG
TTCTCAGTGGCCGCAAGGACAAACTCTGGCTGTACTTCCGTAACTTCACT
GAATGTCCCATCTATCGCATTCGGCTGCCCCAATGCCTTCAACGCCAAAT
GGGCTGCCTTCTGCCCTGAAATCATCATGGCCCCGAATGTAGGTCCCATT
CTAGGGGCACCGTCGATCTCTGCGACTTCCATGCCCGTGACAATCATGCC
AGGCACGATCTCCCTGGTAAGCCTAACGATAGCATCCTCTGCAGTGTTCA
TATCGAGAGCTTTCATTCCGGGGACGGAGTCAATCATGCCAATACTCTTA
AGCCTCTTAACACCGGTAGCCCCAAAAGGGCCGTCATGGCCACACGAGCT
GACCACAATCTTGGCCTCCATCACATTGGGGTCCATGCAAGACTGTGTGT
CGTGATTCATAGACACCAAGGCCCAGTTTGTGACGACGCCACCTACTCTC
CCTCCC
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