DN618197

Overview
NameDN618197
Unique NameDN618197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METVS (Putative thiazole biosynthetic enzyme OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0663 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = -2
Query:  175 MDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 486
            +DP  + AK V+ S GHD    +T  ++ K +G+   VPG K++     E+++ R TREI PG+ V GM         RMG  FG M +SG+K A L L+ L +
Sbjct:  160 VDPITISAKYVIDSTGHDASVVSTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLFVCGMTANAYHAGYRMGAIFGGMYLSGKKCAELILEKLNK 261          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_THENV (Putative thiazole biosynthetic enzyme OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1052 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.272e-12
Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV G++  W  + M+    S +DP   +A+ V+ + GHD    +   +++  +G+   V G K+     +E  +V  T  + PG+   GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:  135 RVAGLLWVWTPIQMSG---SHVDPLYTQARAVLDATGHDAEVISIASRKVPELGV--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYAAGMAVCAVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.272e-12
Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = -2
Query:  181 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 549
            RV G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+   V G K+     +E  +V  T  + PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L
Sbjct:  135 RVTGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDL 252          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12
Identity = 41/124 (33.06%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  181 GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 552
            G+V GVV N   ++        +DP  + AK V+ + GHD     T  ++ + +G++  +PG K+L  +  E+ +++ T+E+ PG+ V GM      G  RMG  FG M ISG+  A + L+ L
Sbjct:  142 GKVSGVVINSYAINK---AGLHIDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGAVFGGMYISGKIVADMILEKL 260          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METBU (Putative thiazole biosynthetic enzyme OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2109 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.170e-12
Identity = 39/122 (31.97%), Postives = 66/122 (54.10%), Query Frame = -2
Query:  178 GVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMID-SVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 540
            G+V NW  V +    +  +DP  + +K+VV   GH     +T  +++    + +  V G K +  +  E  ++  T+E+ P + V GM    + GAPRMGP FG M++SG++ A L ++ LG
Sbjct:  140 GLVINWTAVEIG---KLHVDPLAIRSKVVVDGTGHPAVVCSTVQRKVPGAKLGELGVVGEKPMWADVGEKMLLDTTKEVYPNLYVAGMAANAVAGAPRMGPVFGGMLLSGKQVAELIIERLG 258          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METMP (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis GN=MMP1352 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.702e-12
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  181 MDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 486
            +DP  + AK V+ S GHD     T  ++ K +G+   VPG K++  +  E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A L L+ L
Sbjct:  160 IDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREVFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.314e-12
Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = -2
Query:  181 MDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 486
            +DP  + AK V+ S GHD     T  ++ K +G+   VPG K++     E+++ R TREI PG+ V GM         RMG  FG M +SG+K A + L+ L
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKL 259          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 46/131 (35.11%), Postives = 61/131 (46.56%), Query Frame = -2
Query:  196 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKA-------------LDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHL 549
            R+ GVV NW         +  +DP  + AK  V   GH     A  V+ L   G+I+SV G                +D    E  +V  T+EI PG+ V GM    + G PRMGP FG M++SG +AA L
Sbjct:  135 RISGVVINWMPTIKE---KLHVDPITVVAKFTVDGTGHP----ANLVRLLSKRGIINSVKGSSENLCSCGVVEYEFPMDAENGEKFVVENTKEIYPGLYVMGMAAVSVGGGPRMGPIFGGMIMSGLRAAEL 258          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METM6 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1321 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.077e-11
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = -2
Query:  181 MDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 486
            +DP  + AK V+ S GHD     T  ++ K +G+   VPG K++     E+++ R TREI PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_METM5 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0226 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.077e-11
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = -2
Query:  181 MDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 486
            +DP  + AK V+ S GHD     T  ++ K +G+   VPG K++     E+++ R TREI PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
The following BLAST results are available for this feature:
BLAST of DN618197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
THI4_METVS7.459e-1338.46Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_THENV1.272e-1232.52Putative thiazole biosynthetic enzyme OS=Thermopro... [more]
THI4_PYRAE1.272e-1232.52Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_META31.662e-1233.06Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METBU2.170e-1231.97Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METMP3.702e-1238.24Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM76.314e-1238.24Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_FERNB8.247e-1235.11Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_METM61.077e-1137.25Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM51.077e-1137.25Putative thiazole biosynthetic enzyme OS=Methanoco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618197 ID=DN618197; Name=DN618197; organism=Citrus sinensis; type=EST; length=556bp
TTTTTTTTTTTTTTTTTGGGTTTATTGTTGATTTTGAATTCTCATCAAAA
TGTACATAATTCTCAGATTTTATAATTTTTAAGCATCAACAATCTCGCTG
TTCTCAGTGGCCGCAAGGACAAACTCTGGCTGTACTTCCGTAACTTCACT
GAATGTCCCATCTATCGCATTCGGCTGCCCCAATGCCTTCAACGCCAAAT
GGGCTGCCTTCTGCCCTGAAATCATCATGGCCCCGAATGTAGGTCCCATT
CTAGGGGCACCGTCGATCTCTGCGACTTCCATGCCCGTGACAATCATGCC
AGGCACGATCTCCCTGGTAAGCCTAACGATAGCATCCTCTGCAGTGTTCA
TATCGAGAGCTTTCATTCCGGGGACGGAGTCAATCATGCCAATACTCTTA
AGCCTCTTAACACCGGTAGCCCCAAAAGGGCCGTCATGGCCACACGAGCT
GACCACAATCTTGGCCTCCATCACATTGGGGTCCATGCAAGACTGTGTGT
CGTGATTCATAGACACCAAGGCCCAGTTTGTGACGACGCCACCTACTCTC
CCTCCC
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