DN618194

Overview
NameDN618194
Unique NameDN618194
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length343
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_LEGPN (60 kDa chaperonin OS=Legionella pneumophila GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.539e-32
Identity = 70/109 (64.22%), Postives = 84/109 (77.06%), Query Frame = 3
Query:   15 SEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            S+ IAQVGTISAN +  IG +IA+AMEKVGKEGVIT+ DG  L NEL VVEGM+ DRGYISPYFI NQ+N  CELE P IL+ +KK+S++  ++ VLE   K  RPLLI
Sbjct:  140 SKAIAQVGTISANSDEAIGAIIAEAMEKVGKEGVITVEDGNGLENELYVVEGMQFDRGYISPYFINNQQNMSCELEHPFILLVDKKVSSIREMLSVLEGVAKSGRPLLI 248          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_RHILO (60 kDa chaperonin 1 OS=Rhizobium loti GN=groL1 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.539e-32
Identity = 63/112 (56.25%), Postives = 87/112 (77.68%), Query Frame = 3
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            + +S EIAQVGTI+ANG+  +G +IAKAM+KVG +GVIT+ + KT   EL+VVEGM+ DRGY+SPYF+TN    + ELE+P +L+HEKK+ NL A++ +LE  ++  RPLLI
Sbjct:  138 VKSSAEIAQVGTIAANGDATVGAMIAKAMDKVGNDGVITVEEAKTAETELDVVEGMQFDRGYLSPYFVTNADKMRVELEEPYVLIHEKKLGNLQAMLPILEAVVQSGRPLLI 249          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_AZOSB (60 kDa chaperonin 1 OS=Azoarcus sp. (strain BH72) GN=groL1 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.539e-32
Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = 3
Query:    9 STSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            ST++EIAQVG+ISAN + +IG +IA+AMEKVGKEGVIT+ DGK+L NEL+VVEGM+ DRGY+SPYFI N   Q   LE+P +L+ +KKISN+  ++ VLE   K  RPLLI
Sbjct:  139 STNKEIAQVGSISANSDADIGGIIAQAMEKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNPDKQVAILENPFVLLFDKKISNIRDLLPVLEQVAKAGRPLLI 249          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: HSP60_EMENI (Heat shock protein 60 OS=Emericella nidulans GN=hsp60 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.010e-32
Identity = 69/112 (61.61%), Postives = 87/112 (77.68%), Query Frame = 3
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            I+T EEIAQV TISANG+  +G+LI+ AME+VGKEGVIT+ +GKTL +ELEV EGM+ DRGY SPYFIT+ K QK E E PLIL+ EKKIS +  ++  LE +   +RPL+I
Sbjct:  171 ITTGEEIAQVATISANGDTHVGKLISTAMERVGKEGVITVKEGKTLEDELEVTEGMRFDRGYTSPYFITDAKAQKVEFEKPLILLSEKKISAVQDIIPALEASTTLRRPLVI 282          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_METSS (60 kDa chaperonin OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=groL PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.010e-32
Identity = 67/112 (59.82%), Postives = 90/112 (80.36%), Query Frame = 3
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            I+T++EIAQVG+ISAN +  IG++IA AM+KVGKEGVIT+ DGK+L NEL+VVEGM+ DRGY+SPYFI N + Q  E +DPLIL+++KKIS++  ++  LE   K  +PLLI
Sbjct:  138 ITTNKEIAQVGSISANSDHPIGKIIADAMDKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYLSPYFINNPEKQTVEFDDPLILLYDKKISSIRDLLPTLENVAKAGKPLLI 249          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH605_RHILO (60 kDa chaperonin 5 OS=Rhizobium loti GN=groL5 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.010e-32
Identity = 64/112 (57.14%), Postives = 86/112 (76.79%), Query Frame = 3
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            I TSEE+AQVGTI+ NG+  +G +IA+AM+KVG EGVIT+ + KT   ELEVVEGM+ DRGY+SPYF+TN      +LED  IL+HEKK+SNL A++ +LE  ++  +PL+I
Sbjct:  138 IKTSEEVAQVGTIAGNGDSSVGSMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMVADLEDAYILLHEKKLSNLQAMLPILEAVVQTSKPLVI 249          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_RALEH (60 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groL PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.625e-32
Identity = 68/111 (61.26%), Postives = 88/111 (79.28%), Query Frame = 3
Query:    9 STSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            +TS+EIAQVG ISAN +  IGE IA+AM+KVGKEGVIT+ DGK+L +ELEVVEGM+ DRGY+SPYFI N + Q  +L++P +L+ +KKISN+  ++ VLE   K  RPLLI
Sbjct:  139 TTSKEIAQVGAISANSDTSIGERIAEAMDKVGKEGVITVEDGKSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDNPFVLLFDKKISNIRDLLPVLEQVAKAGRPLLI 249          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_NITOC (60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.625e-32
Identity = 65/109 (59.63%), Postives = 87/109 (79.82%), Query Frame = 3
Query:   15 SEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            S+ I QVGTISAN E  +G++IA+AM+KVGKEGVIT+ +G  L NELEVVEGM+ DRGY+SPYFIT+Q++   +L+DP IL+H+KKISN+  ++ VLE   K  +PLL+
Sbjct:  141 SKAIGQVGTISANAEESVGKIIAEAMDKVGKEGVITVEEGSGLDNELEVVEGMQFDRGYLSPYFITDQQSMAADLDDPYILIHDKKISNIRDLLPVLESVAKAGKPLLV 249          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_NITEU (60 kDa chaperonin OS=Nitrosomonas europaea GN=groL PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.625e-32
Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = 3
Query:    9 STSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            STS+EIAQVG+ISAN + EIG +IA+AM+KVGKEGVIT+ DG  L NEL+VVEGM+ DRGY+SPYF+++   Q   LE P +L+H+KKISN+  ++ VLE   K  +PLLI
Sbjct:  139 STSKEIAQVGSISANSDTEIGRIIAEAMDKVGKEGVITVEDGSGLENELDVVEGMQFDRGYLSPYFVSSADKQIAALESPFVLLHDKKISNIRDLLPVLEQVAKAGKPLLI 249          
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_COXBU (60 kDa chaperonin OS=Coxiella burnetii GN=groL PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.625e-32
Identity = 67/106 (63.21%), Postives = 84/106 (79.25%), Query Frame = 3
Query:   24 IAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            IAQVGTISAN ++ IG++IA+AMEKVGKEGVIT+ DG  L N LEVVEGM+ DRGY+SPYFI NQ+N   ELE+P IL+ +KKISN+  ++ +LE   K  RPLL+
Sbjct:  144 IAQVGTISANSDKSIGDIIAEAMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLV 249          
The following BLAST results are available for this feature:
BLAST of DN618194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LEGPN1.539e-3264.2260 kDa chaperonin OS=Legionella pneumophila GN=gro... [more]
CH601_RHILO1.539e-3256.2560 kDa chaperonin 1 OS=Rhizobium loti GN=groL1 PE=... [more]
CH601_AZOSB1.539e-3262.1660 kDa chaperonin 1 OS=Azoarcus sp. (strain BH72) ... [more]
HSP60_EMENI2.010e-3261.61Heat shock protein 60 OS=Emericella nidulans GN=hs... [more]
CH60_METSS2.010e-3259.8260 kDa chaperonin OS=Methylovorus sp. (strain SS1 ... [more]
CH605_RHILO2.010e-3257.1460 kDa chaperonin 5 OS=Rhizobium loti GN=groL5 PE=... [more]
CH60_RALEH2.625e-3261.2660 kDa chaperonin OS=Ralstonia eutropha (strain AT... [more]
CH60_NITOC2.625e-3259.6360 kDa chaperonin OS=Nitrosococcus oceani (strain ... [more]
CH60_NITEU2.625e-3260.3660 kDa chaperonin OS=Nitrosomonas europaea GN=groL... [more]
CH60_COXBU2.625e-3263.2160 kDa chaperonin OS=Coxiella burnetii GN=groL PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618194 ID=DN618194; Name=DN618194; organism=Citrus sinensis; type=EST; length=343bp
GAATGATCAGCACATCTGAGGAGATAGCACAGGTGGGGACAATATCAGCA
AATGGAGAGAGAGAAATTGGCGAGTTAATTGCAAAGGCCATGGAGAAGGT
CGGCAAAGAAGGAGTAATCACCATACACGATGGGAAGACATTATATAATG
AGTTGGAAGTTGTTGAAGGAATGAAGCTTGACAGGGGTTATATATCTCCT
TATTTCATAACCAACCAGAAAAATCAAAAATGTGAATTAGAAGATCCTCT
CATTCTTGTCCACGAGAAGAAAATCTCAAATCTAACTGCTGTTGTGAGGG
TATTAGAGCTGGCATTGAAGAGACAAAGGCCCTTATTGATTGT
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