DN618194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_BRUA2 (60 kDa chaperonin OS=Brucella abortus (strain 2308) GN=groL PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.313e-35 Identity = 71/112 (63.39%), Postives = 91/112 (81.25%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+TSEE+AQVGTISANGE EIG++IA+AM+KVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TN + +LED IL+HEKK+SNL A++ VLE ++ +PLLI Sbjct: 138 INTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQALLPVLEAVVQTSKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_BRUA1 (60 kDa chaperonin OS=Brucella abortus (strain S19) GN=groL PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.313e-35 Identity = 71/112 (63.39%), Postives = 91/112 (81.25%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+TSEE+AQVGTISANGE EIG++IA+AM+KVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TN + +LED IL+HEKK+SNL A++ VLE ++ +PLLI Sbjct: 138 INTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQALLPVLEAVVQTSKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.313e-35 Identity = 71/112 (63.39%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 IS + EIAQVGTISANG+ EIG +A+AMEKVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TNQ + ELEDP IL+HEKK+SNL +++ VLE ++ +PLLI Sbjct: 138 ISNNSEIAQVGTISANGDAEIGRYLAEAMEKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDPYILIHEKKLSNLQSMLPVLEAVVQSGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH603_SINMW (60 kDa chaperonin 3 OS=Sinorhizobium medicae (strain WSM419) GN=groL3 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.326e-35 Identity = 71/112 (63.39%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 IS + EIAQVGTISANG+ EIG +A+AMEKVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TNQ + ELEDP IL+HEKK+SNL +++ VLE ++ +PLLI Sbjct: 138 ISQNSEIAQVGTISANGDTEIGRYLAEAMEKVGNEGVITVEEAKTSDTELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDPYILIHEKKLSNLQSILPVLEAVVQSGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_ERYLH (60 kDa chaperonin 2 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL2 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.650e-35 Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 ++ SEEIAQVG ISANG+RE+GE IA+AMEKVGKEGVIT+ + K L ELE VEGM+ DRGY+SPYFITN ELE+P IL+HEKK+SNL A++ +LE A++ RPLLI Sbjct: 138 VAGSEEIAQVGIISANGDREVGEKIAEAMEKVGKEGVITVDESKGLEFELETVEGMQFDRGYLSPYFITNPDKMTVELENPYILIHEKKLSNLQAMLPILEAAVQSGRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_RHILO (60 kDa chaperonin 2 OS=Rhizobium loti GN=groL2 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.638e-35 Identity = 68/112 (60.71%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 ++ ++EIAQVGTISANG+ EIG +A+AM+KVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYFITNQ + ELE+P +L+HEKK+SNL A++ VLE ++ +PLLI Sbjct: 138 VTRNDEIAQVGTISANGDAEIGRFLAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFITNQDKMRVELEEPYVLIHEKKLSNLQALLPVLEAVVQSSKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_OCHA4 (60 kDa chaperonin OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=groL PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34 Identity = 70/112 (62.50%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+TSEE+AQVGTISANGE EIG++IA AM+KVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TN + +LED IL+HEKK+SNL A++ VLE ++ +PL+I Sbjct: 138 INTSEEVAQVGTISANGEAEIGKMIADAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQALLPVLEAVVQTSKPLVI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_METPB (60 kDa chaperonin OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=groL PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34 Identity = 68/112 (60.71%), Postives = 91/112 (81.25%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 +++SEE+AQVGTISANG++EIGE+IA AM+KVG EGVIT+ + KT EL+VVEGM+ DRGY+SPYF+TN + ELEDP IL+HEKK+S+L ++ VLE ++ +PLLI Sbjct: 138 VASSEEVAQVGTISANGDKEIGEMIAHAMQKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFVTNAEKMVAELEDPYILIHEKKLSSLQPMLPVLEAVVQTGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_CHLPD (60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groL PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34 Identity = 70/112 (62.50%), Postives = 92/112 (82.14%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 IS +EIAQVGTISAN + EIGELIA+AM+KVGK+GVIT+ + K + EL+VVEGM+ DRGY+SPYF+TN +N + ELEDPLIL+H+KKISN+ ++ +LE + + RPLLI Sbjct: 138 ISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMDTELKVVEGMQFDRGYLSPYFVTNPENMEAELEDPLILIHDKKISNMKELLPILEKSAQSGRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_ECOK1 (60 kDa chaperonin 2 OS=Escherichia coli O1:K1 / APEC GN=groL2 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34 Identity = 71/111 (63.96%), Postives = 91/111 (81.98%), Query Frame = 3 Query: 9 STSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 STS+EIAQVG+ISAN + +IGELIAKAM+KVGKEGVIT+ +G L NEL+VVEGM+ DRGY+SPYFI N ++ + ELEDP IL+H+KKISN+ ++ +LE K +PLLI Sbjct: 139 STSKEIAQVGSISANSDTDIGELIAKAMDKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNPQSMQAELEDPFILLHDKKISNVRDLLPILEGVAKAGKPLLI 249 The following BLAST results are available for this feature:
BLAST of DN618194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618194 ID=DN618194; Name=DN618194; organism=Citrus sinensis; type=EST; length=343bpback to top |