DN618194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_MARMS (60 kDa chaperonin OS=Marinomonas sp. (strain MWYL1) GN=groL PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.032e-28 Identity = 62/106 (58.49%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 24 IAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I QVGTISAN + +G +IA+AME+VGKEGVIT+ +G +EL VVEGM+ DRGY+SPYFI NQ+ ELE+P IL+ +KKISN+ ++ VLE K RPLLI Sbjct: 144 IEQVGTISANSDSSVGRIIAEAMERVGKEGVITVEEGSGFEDELAVVEGMQFDRGYLSPYFINNQETMSAELENPFILLVDKKISNIRDLLPVLEGVAKASRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_GEOLS (60 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groL PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.032e-28 Identity = 60/112 (53.57%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I +EIAQVGTISAN ++ IG++IA+AMEKVGKEGVIT+ + K + LE VEGM+ DRGY+SPYF+++ + + LE+ IL+++KKISN+ ++ VLE K RPL+I Sbjct: 138 IKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVSDPERMEATLENATILIYDKKISNMKDMLPVLEQTAKSGRPLMI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_TOLAT (60 kDa chaperonin OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 60/109 (55.05%), Postives = 83/109 (76.15%), Query Frame = 3 Query: 15 SEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 ++ IAQVGTISAN + +G+LIA+AM+KVG++GVIT+ DG+ L +EL VVEGM+ DRGY+SPYFI Q EL+DP IL+ +KK+SN+ ++ VLE K +PL+I Sbjct: 141 TKAIAQVGTISANSDENVGKLIAEAMDKVGRDGVITVEDGQGLQDELAVVEGMQFDRGYLSPYFINKQDTASVELDDPFILLVDKKVSNIREMLSVLEGVAKAGKPLVI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_SHESW (60 kDa chaperonin OS=Shewanella sp. (strain W3-18-1) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 3 Query: 15 SEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 S+ IAQV TISAN + IGE+IA AMEKVGKEGVIT+ +G+ L NEL+VVEGM+ DRGY+SPYFI + EL+ P +L+ +KKISN+ ++ +LE K +PLLI Sbjct: 141 SKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_SHEPC (60 kDa chaperonin OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 3 Query: 15 SEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 S+ IAQV TISAN + IGE+IA AMEKVGKEGVIT+ +G+ L NEL+VVEGM+ DRGY+SPYFI + EL+ P +L+ +KKISN+ ++ +LE K +PLLI Sbjct: 141 SKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_SHEB8 (60 kDa chaperonin OS=Shewanella baltica (strain OS185) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 3 Query: 15 SEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 S+ IAQV TISAN + IGE+IA AMEKVGKEGVIT+ +G+ L NEL+VVEGM+ DRGY+SPYFI + EL+ P +L+ +KKISN+ ++ +LE K +PLLI Sbjct: 141 SKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_SHEB5 (60 kDa chaperonin OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 3 Query: 15 SEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 S+ IAQV TISAN + IGE+IA AMEKVGKEGVIT+ +G+ L NEL+VVEGM+ DRGY+SPYFI + EL+ P +L+ +KKISN+ ++ +LE K +PLLI Sbjct: 141 SKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_FRATN (60 kDa chaperonin OS=Francisella tularensis subsp. novicida (strain U112) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 9 STSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 S + I QVGTISAN + +G+LIA AM KVGKEGVIT+ +GK +EL+VVEGM+ DRGY+SPYF TNQ+N +LE+P IL+ +KKISN+ ++ VLE K R LLI Sbjct: 139 SDPKSIEQVGTISANSDATVGKLIADAMAKVGKEGVITVEEGKGFEDELDVVEGMQFDRGYLSPYFATNQENMTTDLENPYILIVDKKISNIRDLLPVLEGVSKSGRALLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_DESDA (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 3 Query: 18 EEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 +EIAQ+GTISAN + IG +IA+AM KVGKEGVIT+ + K L ++VVEGM+ DRGY+SPYF+TN + CE+++P IL EKKIS++ ++ VLE K RPL+I Sbjct: 142 KEIAQIGTISANSDTTIGNIIAEAMAKVGKEGVITVEEAKGLETTMDVVEGMRFDRGYLSPYFVTNPEKMVCEMDNPYILCTEKKISSMKDMLPVLEQVAKVNRPLMI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_CYTH3 (60 kDa chaperonin OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 59/112 (52.68%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 IS S EIAQV TISAN + EIG++IA AM+KVGK+GVIT+ + K E++ VEGM+ DRGY+SPYF+TN + EL+ P IL+++KK+S++ ++ +LE ++ RPLLI Sbjct: 137 ISNSNEIAQVATISANNDHEIGKMIAHAMDKVGKDGVITVEEAKGTETEVKTVEGMQFDRGYLSPYFVTNTDKMEVELDRPYILIYDKKVSSMKELLPILEQVVQSGRPLLI 248 The following BLAST results are available for this feature:
BLAST of DN618194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618194 ID=DN618194; Name=DN618194; organism=Citrus sinensis; type=EST; length=343bpback to top |