DN618194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_BRASO (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ORS278) GN=groL1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.392e-33 Identity = 66/112 (58.93%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I++++EIAQVGTISANG+ EIG +A+AM+KVG EGVIT+ + K+L ELEVVEGM+ DRGY+SPYF+TN + + ELEDP IL+HEKK+S L ++ +LE ++ +PLLI Sbjct: 138 ITSNDEIAQVGTISANGDSEIGRFLAEAMQKVGNEGVITVEEAKSLDTELEVVEGMQFDRGYVSPYFVTNSEKMRVELEDPYILIHEKKLSGLQTMLPLLEAVVQSGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 70/112 (62.50%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 + T+EEIAQVGTISANGE EIG++IA+AM KVG EGVIT+ + K L EL+VVEGM+ DRGYISPYFITN ELED LIL+HE K+S+L ++ +LE ++ Q+PLLI Sbjct: 138 VKTNEEIAQVGTISANGETEIGQMIAEAMAKVGNEGVITVEEAKALETELDVVEGMQFDRGYISPYFITNPDKMIVELEDVLILLHESKLSSLQPLLPILESVVQSQKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_AGRT5 (60 kDa chaperonin OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=groL PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 69/112 (61.61%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+TSEE+AQVGTISANGER+IG IA+AM++VG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TN + +LED IL+HEKK+SNL A++ VLE ++ +PL+I Sbjct: 138 INTSEEVAQVGTISANGERQIGLDIAEAMQRVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTGKPLVI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 66/112 (58.93%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 +S + EIAQV TISANG+ E+G ++A+AM+KVG EGVIT+ + K+L ELE VEGM+ DRGY+SPYFITN + K EL+DP IL+HEKK+SNL A++ +LE ++ +PLLI Sbjct: 138 VSANSEIAQVATISANGDEEVGRILAEAMDKVGNEGVITVEEAKSLATELETVEGMQFDRGYLSPYFITNAEKLKVELDDPYILIHEKKLSNLQAMLPLLEAVVQSGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_SINMW (60 kDa chaperonin 2 OS=Sinorhizobium medicae (strain WSM419) GN=groL2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 69/112 (61.61%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 +S + EIAQV TISANG+ EIG +A+AMEKVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYFITNQ+ + ELED IL+HEKK+SNL A++ +LE ++ +PLLI Sbjct: 138 VSKNAEIAQVATISANGDAEIGRYLAEAMEKVGNEGVITVEEAKTAEIELEVVEGMQFDRGYLSPYFITNQEKMRVELEDAYILLHEKKLSNLQAMIPILESVIQSGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_RHORT (60 kDa chaperonin 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I TS E+AQVGTISANG+ E+G++IA AMEKVG EGVIT+ + K L EL+VVEGM+ DRGY+SPYF+TN + +LE+P IL+HEKK+S L A++ VLE ++ RPLLI Sbjct: 138 IKTSAEVAQVGTISANGDEEVGKIIATAMEKVGNEGVITVEEAKGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILLHEKKLSGLQALLPVLEAVVQSSRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_RHIME (60 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 69/112 (61.61%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 +S + EIAQV TISANG+ EIG +A+AMEKVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYFITNQ+ + ELED IL+HEKK+SNL A++ +LE ++ +PLLI Sbjct: 138 VSKNAEIAQVATISANGDAEIGRYLAEAMEKVGNEGVITVEEAKTAEIELEVVEGMEFDRGYLSPYFITNQEKMRVELEDAYILLHEKKLSNLQAMIPILESVIQSGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_SINMW (60 kDa chaperonin 1 OS=Sinorhizobium medicae (strain WSM419) GN=groL1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 69/112 (61.61%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+TS+E+AQVGTISANGE++IG IA+AM+KVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TN + +LED IL+HEKK+SNL A++ VLE ++ +PLLI Sbjct: 138 INTSDEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: HSP60_AJECA (Heat shock protein 60, mitochondrial OS=Ajellomyces capsulata GN=HSP60 PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 2.374e-33 Identity = 69/112 (61.61%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+T+EEIAQV TISANG+ +G+LI+ AMEKVGKEGVIT+ DGKT+ +ELEV EGM+ DRGY+SPYFIT+ K QK E E PLI++ EKKIS + ++ LE + +RPL+I Sbjct: 175 ITTTEEIAQVATISANGDTHVGKLISNAMEKVGKEGVITVKDGKTIEDELEVTEGMRFDRGYVSPYFITDTKAQKVEFEKPLIVLSEKKISAVQDIIPALEASTTLRRPLVI 286
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_AZOSE (60 kDa chaperonin OS=Azoarcus sp. (strain EbN1) GN=groL PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.374e-33 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 3 Query: 9 STSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 ST++EIAQVG+ISAN + +IGE+IAK+M+KVGKEGVIT+ DGK+L NEL+VVEGM+ DRGY+SPYFI N Q LE+P IL+ +KKISN+ ++ VLE K RPLLI Sbjct: 139 STNKEIAQVGSISANSDADIGEIIAKSMDKVGKEGVITVEDGKSLQNELDVVEGMQFDRGYLSPYFINNPDKQVAILENPFILLFDKKISNIRDLLPVLEQVAKAGRPLLI 249 The following BLAST results are available for this feature:
BLAST of DN618194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618194 ID=DN618194; Name=DN618194; organism=Citrus sinensis; type=EST; length=343bpback to top |