DN618194

Overview
NameDN618194
Unique NameDN618194
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length343
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_BORPA (60 kDa chaperonin OS=Bordetella parapertussis GN=groL PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.100e-33
Identity = 66/112 (58.93%), Postives = 90/112 (80.36%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            ++TS+EIAQVG+ISAN +  IG++IA AM+KVGKEGVIT+ DGK+L NEL+VVEGM+ DRGY+SPYFI + + Q   L+DP +L+++KK+SN+  ++ VLE   K  RPLLI
Sbjct:  138 VTTSKEIAQVGSISANSDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEKQVAALDDPYVLIYDKKVSNIRDLLPVLEQVAKSSRPLLI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_BORBR (60 kDa chaperonin OS=Bordetella bronchiseptica GN=groL PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.100e-33
Identity = 66/112 (58.93%), Postives = 90/112 (80.36%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            ++TS+EIAQVG+ISAN +  IG++IA AM+KVGKEGVIT+ DGK+L NEL+VVEGM+ DRGY+SPYFI + + Q   L+DP +L+++KK+SN+  ++ VLE   K  RPLLI
Sbjct:  138 VTTSKEIAQVGSISANSDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEKQVAALDDPYVLIYDKKVSNIRDLLPVLEQVAKSSRPLLI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH603_RHIME (60 kDa chaperonin 3 OS=Rhizobium meliloti GN=groL3 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.100e-33
Identity = 65/112 (58.04%), Postives = 90/112 (80.36%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            + +S EIAQVGTI+ANG+  +GE+IA+AMEKVG EGVIT+ + +T   EL+VVEGM+ DRGY+SPYF+TN +  + ELEDP IL+HEKK+ +L A++ +LE A++  +PLLI
Sbjct:  138 VISSSEIAQVGTIAANGDAGVGEMIARAMEKVGNEGVITVEEARTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDPYILIHEKKLGSLQAMLPILEAAVQSGKPLLI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH603_RHILE (60 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=groL3 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.100e-33
Identity = 65/112 (58.04%), Postives = 89/112 (79.46%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            + +S EIAQVGTI+ANG+  IGE+IAKAM+KVG EGVIT+ + +T   EL+VVEGM+ DRGY+SPYF+TN +  + ELEDP ILVHEKK+ +L A++ +LE  ++  +PLL+
Sbjct:  138 VKSSSEIAQVGTIAANGDAAIGEMIAKAMDKVGNEGVITVEEARTAETELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDPYILVHEKKLGSLQAMLPILEAVVQTGKPLLL 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH602_BURVG (60 kDa chaperonin 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=groL2 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.100e-33
Identity = 71/112 (63.39%), Postives = 89/112 (79.46%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            IST +EIAQVG ISAN +  IG++IA AMEKVGKEGVIT+ DGK+L NEL+VVEGM+ DRGYISPYFI + + Q   L+D LIL+H+KKISN+  ++ +LE A K  +PLLI
Sbjct:  138 ISTHKEIAQVGAISANADDAIGKIIADAMEKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYISPYFINDPEKQAAYLDDALILLHDKKISNIRDLLPILEAASKAGKPLLI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_RHISN (60 kDa chaperonin 1 OS=Rhizobium sp. (strain NGR234) GN=groL1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.100e-33
Identity = 66/112 (58.93%), Postives = 89/112 (79.46%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            ++ ++EIAQVGTISANG+ EIG  +A+A+EKVG EGVIT+ + KT   ELEVVEGM+ DRGY+SPYF+TN    + ELE+P +L+HEKK+SNL A++ VLE  ++  +PLLI
Sbjct:  138 VTKNDEIAQVGTISANGDIEIGRFLAEAVEKVGNEGVITVEEAKTAVTELEVVEGMQFDRGYLSPYFVTNPDKMRVELEEPYLLIHEKKLSNLQALLPVLESVVQSGKPLLI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_RHIL3 (60 kDa chaperonin 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.100e-33
Identity = 68/112 (60.71%), Postives = 90/112 (80.36%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            ISTSEE+AQVGTISANG++++G  IA+AM+KVG EGVIT+ + KT   ELEVVEGM+ DRGY+SPYF+TN +    +LED  IL+HEKK+SNL +++ VLE  ++  +PLLI
Sbjct:  138 ISTSEEVAQVGTISANGDKQVGLDIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAVVQTGKPLLI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_RHOCS (60 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groL PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33
Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            ++T++EIAQVGTISANGE EIG++IA+AM+KVG EGVIT+ + K L  EL+VVEGM+ DRGY+SPYF+TN      ELE P IL+ EKK+S L A++ VLE  ++  RPLLI
Sbjct:  138 VTTNDEIAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKALETELDVVEGMQFDRGYLSPYFVTNADKMVAELESPYILLFEKKLSGLQAMLPVLEAVVQSSRPLLI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_MAGSA (60 kDa chaperonin OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=groL PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33
Identity = 68/112 (60.71%), Postives = 89/112 (79.46%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            ++T+ EIAQVGTISANGE+EIG++IAKAMEKVG EGVIT+ + K L  EL+VVEGM+ DRGY SPYF+TN +    EL++P IL+HEKK+S L  ++ VLE  ++  RPL+I
Sbjct:  138 VATNAEIAQVGTISANGEKEIGDMIAKAMEKVGNEGVITVEEAKGLDTELDVVEGMQFDRGYTSPYFVTNAEKMTVELDNPYILLHEKKLSGLQPLLPVLEQVVQSGRPLVI 249
[Close]
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33
Identity = 67/112 (59.82%), Postives = 89/112 (79.46%), Query Frame = 3 
Query:    6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341
            I++ EEIAQVGTISANGE EIGE+IA AM+KVG EGVIT+ + K L+ EL+VVEGM+ DRGYISPYF+TN +    +L+ P IL+HEKK+S+L  ++ +LE  ++  RPL+I
Sbjct:  138 ITSPEEIAQVGTISANGETEIGEMIASAMQKVGSEGVITVEEAKGLHTELDVVEGMQFDRGYISPYFVTNPEKMTADLDSPYILIHEKKLSSLQPMLPLLESVVQSGRPLVI 249
The following BLAST results are available for this feature:
BLAST of DN618194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BORPA3.100e-3358.9360 kDa chaperonin OS=Bordetella parapertussis GN=g... [more]
CH60_BORBR3.100e-3358.9360 kDa chaperonin OS=Bordetella bronchiseptica GN=... [more]
CH603_RHIME3.100e-3358.0460 kDa chaperonin 3 OS=Rhizobium meliloti GN=groL3... [more]
CH603_RHILE3.100e-3358.0460 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=... [more]
CH602_BURVG3.100e-3363.3960 kDa chaperonin 2 OS=Burkholderia vietnamiensis ... [more]
CH601_RHISN3.100e-3358.9360 kDa chaperonin 1 OS=Rhizobium sp. (strain NGR23... [more]
CH601_RHIL33.100e-3360.7160 kDa chaperonin 1 OS=Rhizobium leguminosarum bv.... [more]
CH60_RHOCS4.049e-3360.7160 kDa chaperonin OS=Rhodospirillum centenum (stra... [more]
CH60_MAGSA4.049e-3360.7160 kDa chaperonin OS=Magnetospirillum magneticum (... [more]
CH60_GLUOX4.049e-3359.8260 kDa chaperonin OS=Gluconobacter oxydans GN=groL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618194 ID=DN618194; Name=DN618194; organism=Citrus sinensis; type=EST; length=343bp
GAATGATCAGCACATCTGAGGAGATAGCACAGGTGGGGACAATATCAGCA
AATGGAGAGAGAGAAATTGGCGAGTTAATTGCAAAGGCCATGGAGAAGGT
CGGCAAAGAAGGAGTAATCACCATACACGATGGGAAGACATTATATAATG
AGTTGGAAGTTGTTGAAGGAATGAAGCTTGACAGGGGTTATATATCTCCT
TATTTCATAACCAACCAGAAAAATCAAAAATGTGAATTAGAAGATCCTCT
CATTCTTGTCCACGAGAAGAAAATCTCAAATCTAACTGCTGTTGTGAGGG
TATTAGAGCTGGCATTGAAGAGACAAAGGCCCTTATTGATTGT
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