DN618194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_CAUSK (60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33 Identity = 66/112 (58.93%), Postives = 91/112 (81.25%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 ++T+ EIAQVGTISANG++++GE+IAKAM+KVG EGVIT+ + KT EL+VVEGM+ DRGY+SPYFITN + +LE+PLIL+ EKK+S+L ++ VLE ++ RPL+I Sbjct: 138 VTTNNEIAQVGTISANGDKDVGEMIAKAMDKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFITNADKMEVQLEEPLILLFEKKLSSLQPLLPVLEAVVQSGRPLVI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_BEII9 (60 kDa chaperonin OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=groL PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33 Identity = 65/112 (58.04%), Postives = 92/112 (82.14%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 +++++EIAQVGTISANG++ +G++I+ AM+KVG EGVIT+ + K+L EL+VVEGM+ DRGY+SPYFITN + ELEDP ILVHEKK+S+L A++ VLE ++ +PL+I Sbjct: 138 VTSNDEIAQVGTISANGDKSVGDMISTAMQKVGNEGVITVEEAKSLETELDVVEGMQFDRGYLSPYFITNAEKMIAELEDPYILVHEKKLSSLQAMLPVLEAVVQTGKPLVI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33 Identity = 68/112 (60.71%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+TS+E+AQVGTISANGE++IG IA+AM+KVG EGVIT+ + KT ELEVV+GM+ DRGY+SPYF+TN + +LED IL+HEKK+SNL A++ VLE ++ +PLLI Sbjct: 138 INTSDEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEAKTAETELEVVDGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTGKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH603_RHILO (60 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33 Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I TSEE+AQVGTI+ NG+ +G++IA+AM+KVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYF+TN +LED IL+HEKK+SNL A++ VLE ++ +PLLI Sbjct: 138 IKTSEEVAQVGTIAGNGDESVGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTSKPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_DECAR (60 kDa chaperonin OS=Dechloromonas aromatica (strain RCB) GN=groL PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.289e-33 Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 Query: 9 STSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 +T++EIAQVG+ISAN + +IGE+IA AMEKVGKEGVIT+ DGK+L NEL+VVEGM+ DRGY+SPYFI N Q+ LE+P +L+ +KKISN+ ++ +LE K RPLLI Sbjct: 139 TTTKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVEDGKSLANELDVVEGMQFDRGYLSPYFINNGDKQQALLENPFVLLFDKKISNIRDLLPILEQVAKAGRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.289e-33 Identity = 67/112 (59.82%), Postives = 91/112 (81.25%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 IS+ +EIAQVGTISAN + EIGELIA+AMEKVGK+GVIT+ + K + EL+VVEGM+ DRGY+SPYF+TN + EL++PLIL+++KKISN+ ++ +LE + + RPLLI Sbjct: 138 ISSKKEIAQVGTISANNDPEIGELIAEAMEKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYFVTNSDTMEAELDNPLILIYDKKISNMKELLPILEKSAQSGRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_RHORT (60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.289e-33 Identity = 66/112 (58.93%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+T++EIAQVGTISANG+ E+G++IA+AM+KVG EGVIT+ + K L EL+VVEGM+ DRGY+SPYF+TN + +LE+P IL+HEKK+S L ++ VLE ++ RPLLI Sbjct: 138 IATNDEIAQVGTISANGDEEVGKIIARAMDKVGHEGVITVEEAKGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILIHEKKLSGLQPLLPVLEAVVQSGRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_RICTY (60 kDa chaperonin OS=Rickettsia typhi GN=groL PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 6.907e-33 Identity = 67/112 (59.82%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I++ EEIAQVGTIS+NG++EIGE IAKAME+VGKEGVIT+ + K ++EVV+GM DRGY+SPYF+TN + ELE+P IL+ EKK+SNL ++ +LE ++ QRPLLI Sbjct: 138 INSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAVVQSQRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_RICRS (60 kDa chaperonin OS=Rickettsia rickettsii (strain Sheila Smith) GN=groL PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.907e-33 Identity = 67/112 (59.82%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I++ EEIAQVGTIS+NG++EIGE IAKAME+VGKEGVIT+ + K ++EVV+GM DRGY+SPYF+TN + ELE+P IL+ EKK+SNL ++ +LE ++ QRPLLI Sbjct: 138 INSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAVVQSQRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_RICRO (60 kDa chaperonin OS=Rickettsia rickettsii (strain Iowa) GN=groL PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.907e-33 Identity = 67/112 (59.82%), Postives = 89/112 (79.46%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I++ EEIAQVGTIS+NG++EIGE IAKAME+VGKEGVIT+ + K ++EVV+GM DRGY+SPYF+TN + ELE+P IL+ EKK+SNL ++ +LE ++ QRPLLI Sbjct: 138 INSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAVVQSQRPLLI 249 The following BLAST results are available for this feature:
BLAST of DN618194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618194 ID=DN618194; Name=DN618194; organism=Citrus sinensis; type=EST; length=343bpback to top |